Gene detail

Detailed information of agem_s0144.g37.t1 in Acropora gemmifera

Genomic Location: sc0000144_pilon:655324...663372
NR annotation: XP_044163311.1, DNA mismatch repair protein Msh3-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P13705	DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
P20585	DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
Q1DQ73	DNA mismatch repair protein MSH3 OS=Coccidioides immitis (strain RS) OX=246410 GN=MSH3 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00488	MutS_V	MutS domain V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045076	Family	DNA mismatch repair MutS family	Interproscan
IPR000432	Domain	DNA mismatch repair protein MutS, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0030983	Molecular Function	mismatched DNA binding	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan