Gene detail

Detailed information of agem_s0145.g33.t1 in Acropora gemmifera

Genomic Location: sc0000145_pilon:404687...411305
NR annotation: XP_015773641.1, PREDICTED: uncharacterized protein LOC107351847 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

agem_s0145.g33.t1

ATGATGGCACAGCGATGGAGTGTTCCCAGGGGAAACCACATAAGTCCTCAATGTGTGGATGCCTTGATGGTGAAGAAGCCTCAGGAGGGTGCAAACTATGACAAATTCATTAAAACTACTCTGTACTCGCCTGCATCCCAGTATCATATTCTGGGCCCTAATGAAAAAGCTCAACTCAAAAGTCTAAATCCTGAGCCTTTGCTGTGGAGTTTGTTACCAGATCTGGAAAACTTTGCAAGCTCACAACTGCCTTCTGTACAAACCAAATTCGGAATGGTGCCAAAGGGGTCTGTAATATCTTACCAACAAAGGCTCACAGAAAAATATGTCATAAACAATTATGCCCAAACCACATTCCCCAAGCTGCCCCTGCCTGATGCAGTGCATGAAACAAAGAAATTACGTGAATTGTTTGACAAGATTGAAATCAACATTCGAGGTTTGAACGCATTAGGAGTTGAGTCACAGTCCTTTGGGAATTTATTGGTCCCAATCGTGATGGAGAAAATCCCCTCAGAGTTACGACTGGTTGTAAGCCGTAAGTTTGGCAGCGAGGAATCATGGAATCTTGATGCTTTGTTGAGTGCACTGAAAACTGAGTTGGAAGCCAGAGAAAGATGTATTGCGATGAAAACAAGCGGTCCAAATGTCAATACAACCAAGTTCGAACAGTACAGAGCGAGAAACAAACAGCCCTATTCTGCCTCTGCCCTTTATACAGGCAGCGAGGAATTTACTCAACATTGTGTTTTTTGCAAGAAGAATCACAAATCCATTAACTGCATGACTGTCACTGAACCGAAAGCTAGAAGAACAATACTGAGACGAAACGGCAAGTGTTTCGTGTGCCTGAAGGGTGGCCATATCTCCACAAATTGTCCATCAAGAGCAAAATGCTTTAACTGTGAAGGTAGACACCATGTAACCATTTGTGAAAGAATAAGGAACACTCTAACATCTAGAAATGTAGTTAGGGAAGAAGCATCACCACGTGGATCTGGATCATGTCAAGATGGGAGTAGAGATGCTGGAACTTCAGCAATGCACATAAGCAATAACGCCAACTCTGTGCTGTTACAAATAGCCCAAGCCTTTGTTTGTAGACCAGATAACGAGCAACTTGGATTGAATGCTCATGTGATATTTGATTCCTGTAGCCAGAGATCATACATAACCAGTCAAGCACGTGAGAAATTGAATCTGCCAACCATTGGTAAGGAGACTCTTTTGATCAAAACATTTGGAGATAATTCAGCCTCTGTGAAAGAATGCGATGTTGTGCAACTGTGTGTCAGAACATTGGATGGAATGAATGTGTATATCACCTCATACGTTGTACCAGTAATTTGCAGCCCTGTGTCCAATCAACAGTCTCAAGGCACATTGGAATGCTACCCCTATTTACAGGGTCTACAACTTGCATGTGATACAAGTGATTCTGTCAATGTTGATGTGCTGATAGGAGCAGATTATTACTGGTCTTTCTTCACTGGGAACATCATTAAGGGAGATCCCTATGGACCAGTAGCCCTTGAAACCAACTTAGGTTGGGTTTTGTCCGGTCCAAGTGTTTGCTCAAGGTTCACAAGATCTTGCACGGTGAATTTGAGTTCCACGCATGTGTTAAAGATAGAGTCCACACAGATGAGTGATATGAAGGATGATCTGCAGAAATTCTGGGACCTAGAAACTTTGGGCATTAAGGAACATGAAACTTCAGTCTATGATAAGTTTTCAAATGACATCACATTCACTGGAGAGAGATATCAAGTCAAGCTACCATTTAAGGATAATCACCCCATGTTACCAGATAACTATACAGTGGCATTACGTAGACTGACAACAACGATCAAGAAGCTTAAGAACCAGCCAGAAATTTTGAAGCAGTATGATGATGGTGACGTGGGCAGTGCGTTCACGTTATCTAAGGAGATAAAGCTCTGTCTGAAGTCAGGAGGCTTTAATATGAGAAAGTGGAGTAGCAATTCGGAAAGTTTGCTGAGATCACTGGAACAAGATGAAGCTTTCAGTGACGACTTTGAAAAGAGCAATAGACCTAAGGTAGCAGAAGAAGACGAAAGCTTCTCTAAGTCAGTTTTCAAGCACAGTTCAGAAAAGGAGCAAAGGGTTTTGGGAATGCTTTGGAACCCAACCCAAGATGAGCTGATTTATGATCTGAACAAGACTTTGGGAGAAGTAGATGCCCAACCCGTAACAAAAAGATTGATTCTTAGTACAGCCACAAGATTTTTTGACCCCCTAGGTCATTCTTCCGTTAAAGATGATGTTTCAGAAACTTTGCAAGGATGGAAAGGACTGGGACGAATTGGTCGATGCTGA

Transcript

agem_s0145.g33.t1

ATCAATGAAAAAAAACGAAACGCCACACTCCCTTCAAGTGATAATTGGTATGGATCAAACAACAGTGTCTGGAAAGTGTTCTTGTGTAGCAGGTGCTGGAGGGATTTGTCACCATGTTGTGGGCCTTCTTTTTTACTTGTCACACTGTAAGCAACTTGGGCTAAAGAGCCTACCTGATGATCTGACATGTACTATGATGGCACAGCGATGGAGTGTTCCCAGGGGAAACCACATAAGTCCTCAATGTGTGGATGCCTTGATGGTGAAGAAGCCTCAGGAGGGTGCAAACTATGACAAATTCATTAAAACTACTCTGTACTCGCCTGCATCCCAGTATCATATTCTGGGCCCTAATGAAAAAGCTCAACTCAAAAGTCTAAATCCTGAGCCTTTGCTGTGGAGTTTGTTACCAGATCTGGAAAACTTTGCAAGCTCACAACTGCCTTCTGTACAAACCAAATTCGGAATGGTGCCAAAGGGGTCTGTAATATCTTACCAACAAAGGCTCACAGAAAAATATGTCATAAACAATTATGCCCAAACCACATTCCCCAAGCTGCCCCTGCCTGATGCAGTGCATGAAACAAAGAAATTACGTGAATTGTTTGACAAGATTGAAATCAACATTCGAGGTTTGAACGCATTAGGAGTTGAGTCACAGTCCTTTGGGAATTTATTGGTCCCAATCGTGATGGAGAAAATCCCCTCAGAGTTACGACTGGTTGTAAGCCGTAAGTTTGGCAGCGAGGAATCATGGAATCTTGATGCTTTGTTGAGTGCACTGAAAACTGAGTTGGAAGCCAGAGAAAGATGTATTGCGATGAAAACAAGCGGTCCAAATGTCAATACAACCAAGTTCGAACAGTACAGAGCGAGAAACAAACAGCCCTATTCTGCCTCTGCCCTTTATACAGGCAGCGAGGAATTTACTCAACATTGTGTTTTTTGCAAGAAGAATCACAAATCCATTAACTGCATGACTGTCACTGAACCGAAAGCTAGAAGAACAATACTGAGACGAAACGGCAAGTGTTTCGTGTGCCTGAAGGGTGGCCATATCTCCACAAATTGTCCATCAAGAGCAAAATGCTTTAACTGTGAAGGTAGACACCATGTAACCATTTGTGAAAGAATAAGGAACACTCTAACATCTAGAAATGTAGTTAGGGAAGAAGCATCACCACGTGGATCTGGATCATGTCAAGATGGGAGTAGAGATGCTGGAACTTCAGCAATGCACATAAGCAATAACGCCAACTCTGTGCTGTTACAAATAGCCCAAGCCTTTGTTTGTAGACCAGATAACGAGCAACTTGGATTGAATGCTCATGTGATATTTGATTCCTGTAGCCAGAGATCATACATAACCAGTCAAGCACGTGAGAAATTGAATCTGCCAACCATTGGTAAGGAGACTCTTTTGATCAAAACATTTGGAGATAATTCAGCCTCTGTGAAAGAATGCGATGTTGTGCAACTGTGTGTCAGAACATTGGATGGAATGAATGTGTATATCACCTCATACGTTGTACCAGTAATTTGCAGCCCTGTGTCCAATCAACAGTCTCAAGGCACATTGGAATGCTACCCCTATTTACAGGGTCTACAACTTGCATGTGATACAAGTGATTCTGTCAATGTTGATGTGCTGATAGGAGCAGATTATTACTGGTCTTTCTTCACTGGGAACATCATTAAGGGAGATCCCTATGGACCAGTAGCCCTTGAAACCAACTTAGGTTGGGTTTTGTCCGGTCCAAGTGTTTGCTCAAGGTTCACAAGATCTTGCACGGTGAATTTGAGTTCCACGCATGTGTTAAAGATAGAGTCCACACAGATGAGTGATATGAAGGATGATCTGCAGAAATTCTGGGACCTAGAAACTTTGGGCATTAAGGAACATGAAACTTCAGTCTATGATAAGTTTTCAAATGACATCACATTCACTGGAGAGAGATATCAAGTCAAGCTACCATTTAAGGATAATCACCCCATGTTACCAGATAACTATACAGTGGCATTACGTAGACTGACAACAACGATCAAGAAGCTTAAGAACCAGCCAGAAATTTTGAAGCAGTATGATGATGGTGACGTGGGCAGTGCGTTCACGTTATCTAAGGAGATAAAGCTCTGTCTGAAGTCAGGAGGCTTTAATATGAGAAAGTGGAGTAGCAATTCGGAAAGTTTGCTGAGATCACTGGAACAAGATGAAGCTTTCAGTGACGACTTTGAAAAGAGCAATAGACCTAAGGTAGCAGAAGAAGACGAAAGCTTCTCTAAGTCAGTTTTCAAGCACAGTTCAGAAAAGGAGCAAAGGGTTTTGGGAATGCTTTGGAACCCAACCCAAGATGAGCTGATTTATGATCTGAACAAGACTTTGGGAGAAGTAGATGCCCAACCCGTAACAAAAAGATTGATTCTTAGTACAGCCACAAGATTTTTTGACCCCCTAGGTCATTCTTCCGTTAAAGATGATGTTTCAGAAACTTTGCAAGGATGGAAAGGACTGGGACGAATTGGTCGATGCTGAACTCAATCACCAATGGCTGACGACTCTGTCGGATTTGAGACAAACTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05585	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR008737	Domain	Peptidase aspartic, putative	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan