Gene detail

Detailed information of agem_s0148.g7.t1 in Acropora gemmifera

Genomic Location: sc0000148_pilon:147336...150387
NR annotation: XP_015772982.1, PREDICTED: solute carrier family 25 member 36-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0148.g7.t1

GTTCGGAACTACAATATTTTCATCAGCGATCATCAAGAATAATATACTTACCGGCTTTTTCGTTGTCGTTGTACAAATCTGGTTGGGTCTTGAAGGATTTCTTATTCAATATGAATCAACCTCCAAAGCAGCAACGCATGATAGTGCATTTTGTTGCTGGTGGTTTGGGAGGTTCTGTCGGTGCGTTCGTAACATGTCCACTCGAGGTTATTCAGACGAGACTACAATCATCCGCCTTTCATCTTCAGCGAAATACTAAGATGAATACAGCCAAGCCTCGTGTCATAAAGAACATTTCAACAACTGCACCATCTGCGAATTTCAGTACGACCAATGTTGCCGACACGACGCTGAACATCGCAGCGAATCGTTTCAAAGGAATAATTTCATATGGAAGACTGATGGTACAGCAAGAAGGCTTCTTGTCTCTTTACAAGGGTCTTGGACCCACCTTGCTCGGCGTTACTCCATCAAGAGCTATTTATTTTTCATTTTATTCTAAAACAAAGGATTTCTTAAACAAATGCGGCAAATTCAGCCCCGATTCCTCACCGGTTCACATGATTTCAGCCGCTTTTGCGTCGTTCGTAAACCACACTGTCACCAATCCCCTATGGTTCGTGAAGACACGACTTCAACTAGACAACAGGAAGGCCAGACAAGTTACTGCCATTCAAATCGTCAGGGACGCTTACAAAACTGAAGGAATTCGAGCTTTTTATCGAGGACTTTCTGCGTCTTACGTTGGGATTTCAGAAACGGTCGTTCACTTTACAATCTATGAAAAAGTGAAAGTGAAACTAATCAATTTGCAGCGGAAGAAAAATGACAAATTTTCTGTGCTCGAGGGTACGCTTGCTGCCGGCATTTCCAAGTGCATTGCGGCGAGCCTGTGTTATCCTCATGAAGTTGCTCGGACTCGACTTCGCCAACAAGAAAATGAGTTACTGGGAAAGAACAAATACAAGTCGTTTCTTCAAACTCTAAAAACTGTTGCGAAAGAGGAAGGTTGGATTGCTCTTTACGGAGGCCTAGGAACACATTTACTTCGTCAAGTTCCAAACACGGCAATTATGTTTTTCACTTACGAATTCGTGGTCTATCTGTTAGACTCGGGAAGTGGATAAAAAATATGTCAAATTATAAACAGAACTTAATATATCATTAAATTGAGTACAAATTTGTAGAGCCAGAATTTATTGCAATGCAATACAAATGCAGTTTATTCGCATTTTGATGTTTCATTGTCCCTTTATAATCTATCACTCGTATAGGTAACCGATTGAATCAAAACTGATTTTTGAAATGACGTATTCCCTAAACATGGATTCTACCCATACTGCAAATAATATTCATGACATTGTTATCTAGAACTATCGAAGTAGAACTGTTATGAAACTTTAAATGTCAAGGGTTTCTGCCCAAGGTTATGTAACTTGTATTGTTGTCAAGTGCTAATTAATTACTTGACAAGTGATAAAACAGAAGACAACAAGAATATATTGCAGTCACACCATATTTGCTCATACCCTTAAAACATTTTCCAAAGATTTCTAGTGGTCTTTTACTTAAAAAAAAAATTAGAAAGTCAGTATTACCCACTGATGAGTGTAGAGCTCTTGCTCTATACAAACATttcaaaacagcttttgttggccattttatctcagagctgcaaaagtgttttcagctcgctttattgctgacgcatcccttggccaaattaggtaaaacaggtatgtgaactgatagcctgtgtctggcgagccaatgaaaatgctggaaatctgatatctatatttGTATGTGTATTGCAGTTATGAGTGGCACTAAAGCAGCTCCACTTTAAAATGAGCATGGGAAAATACAGTGTTCATTCCATATCATGGAGAATGGGAATTGGTTACTCATCCTAAAGTGCAGTCATGTGATTATACCTAGATATCATTGTACATAACTCAGTTGATTGAGTTGTAATAAAGCACTTGCGCAGAA

Protein

Uniprot

Uniprot term	Description
Q96CQ1	Solute carrier family 25 member 36 OS=Homo sapiens OX=9606 GN=SLC25A36 PE=1 SV=1
Q6DG32	Solute carrier family 25 member 36-A OS=Danio rerio OX=7955 GN=slc25a36a PE=2 SV=1
Q5ZKP7	Solute carrier family 25 member 36 OS=Gallus gallus OX=9031 GN=SLC25A36 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR049562	Family	Solute carrier family 25 member 33/36-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45829	MITOCHONDRIAL CARRIER PROTEIN RIM2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000002	Biological Process	mitochondrial genome maintenance	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0015218	Molecular Function	pyrimidine nucleotide transmembrane transporter activity	Interproscan
GO:1990519	Biological Process	pyrimidine nucleotide import into mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15116	SLC25A33_36, RIM2; solute carrier family 25, member 33/36	-	Transporters	ko02000	deepkoala