Detailed information of agem_s0150.g4.t1 in Acropora gemmifera

Genomic Location: sc0000150_pilon:115509...139595
NR annotation: XP_029205406.2, uncharacterized protein LOC114969244 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P202Whirlin OS=Homo sapiens OX=9606 GN=WHRN PE=1 SV=4
Q810W9Whirlin OS=Rattus norvegicus OX=10116 GN=Whrn PE=1 SV=1
Q80VW5Whirlin OS=Mus musculus OX=10090 GN=Whrn PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF04685DUF608Glycosyl-hydrolase family 116, catalytic regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR008928Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR012341Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan
IPR006775DomainGlycosyl-hydrolase family 116, catalytic regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan

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