Detailed information of agem_s0175.g14.t1 in Acropora gemmifera

Genomic Location: sc0000175_pilon:379079...407995
NR annotation: XP_029189732.2, uncharacterized protein LOC114956706 isoform X2 [Acropora millepora]
Species abbreviation AGEMM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UHJ3Scm-like with four MBT domains protein 1 OS=Homo sapiens OX=9606 GN=SFMBT1 PE=1 SV=2
Q9JMD2Scm-like with four MBT domains protein 1 OS=Rattus norvegicus OX=10116 GN=Sfmbt1 PE=1 SV=2
Q96JM7Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens OX=9606 GN=L3MBTL3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004967 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02820
all species →		MBTmbt repeatDomainInterproscan
PF12140
all species →		SLEDSLED domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004092
all species →		RepeatMbt repeatInterproscan
IPR038348
all species →		Homologous_superfamilySLED domain superfamilyInterproscan
IPR021987
all species →		DomainSLED domainInterproscan
IPR050548
all species →		FamilyPolycomb group and chromatin remodeling factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247
all species →		POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for agem_s0175.g14.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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