Detailed information of agem_s0179.g9.t1 in Acropora gemmifera

Genomic Location: sc0000179_pilon:61516...63145
NR annotation: XP_015753213.1, PREDICTED: homeobox protein ceh-1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P15858Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE=4 SV=1
P22807Homeobox protein slou OS=Drosophila melanogaster OX=7227 GN=slou PE=2 SV=1
P19601Homeobox protein SAX-1 (Fragment) OS=Gallus gallus OX=9031 GN=SAX1 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR042247FamilyT-cell leukemia homeobox protein 1/2/3Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45921IP01054PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048513Biological Processanimal organ developmentInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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