Detailed information of agem_s0181.g2.t1 in Acropora gemmifera

Genomic Location: sc0000181_pilon:11027...55975
NR annotation: XP_015760438.1, PREDICTED: uncharacterized protein K02A2.6-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ZBV2ATP-dependent RNA helicase DDX19A OS=Bos taurus OX=9913 GN=DDX19A PE=2 SV=1
Q61655ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2
Q9NUU7ATP-dependent RNA helicase DDX19A OS=Homo sapiens OX=9606 GN=DDX19A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF05495zf-CHYCHY zinc fingerDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR017921DomainZinc finger, CTCHY-typeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR037275Homologous_superfamilyZinc finger, CTCHY-type superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037274Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan
IPR008913DomainZinc finger, CHY-typeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

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