Detailed information of agem_s0192.g9.t1 in Acropora gemmifera

Genomic Location: sc0000192_pilon:100646...109726
NR annotation: XP_015757767.1, PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WV22Non-structural maintenance of chromosomes element 1 homolog OS=Homo sapiens OX=9606 GN=NSMCE1 PE=1 SV=5
Q5RAZ5Non-structural maintenance of chromosomes element 1 homolog OS=Pongo abelii OX=9601 GN=NSMCE1 PE=2 SV=1
Q3T0X7Non-structural maintenance of chromosomes element 1 homolog OS=Bos taurus OX=9913 GN=NSMCE1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08746zf-RING-likeRING-like domainDomainInterproscan
PF07574SMC_Nse1Nse1 non-SMC component of SMC5-6 complexFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014857DomainNon-structural maintenance of chromosomes element 1, RING C4HC3-typeInterproscan
IPR011513FamilyNon-structural maintenance of chromosomes element 1Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR002219DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20973NON-SMC ELEMENT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22817NSMCE1, NSE1; non-structural maintenance of chromosomes element 1EC:2.3.2.27
DNA repair and recombination proteinsko03400deepkoala

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