Gene detail

Detailed information of agem_s0205.g9.t3 in Acropora gemmifera

Genomic Location: sc0000205_pilon:189557...203825
NR annotation: XP_044174739.1, DNA-directed RNA polymerase III subunit RPC2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P59470	DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus OX=10090 GN=Polr3b PE=1 SV=2
Q9NW08	DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens OX=9606 GN=POLR3B PE=1 SV=2
P25167	DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster OX=7227 GN=Polr3B PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04561	RNA_pol_Rpb2_2	RNA polymerase Rpb2, domain 2	Domain	Interproscan
PF04563	RNA_pol_Rpb2_1	RNA polymerase beta subunit	Family	Interproscan
PF04565	RNA_pol_Rpb2_3	RNA polymerase Rpb2, domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007642	Domain	RNA polymerase Rpb2, domain 2	Interproscan
IPR007644	Domain	RNA polymerase, beta subunit, protrusion	Interproscan
IPR015712	Family	DNA-directed RNA polymerase, subunit 2	Interproscan
IPR037034	Homologous_superfamily	RNA polymerase Rpb2, domain 2 superfamily	Interproscan
IPR007645	Domain	RNA polymerase Rpb2, domain 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0001056	Molecular Function	RNA polymerase III activity	Interproscan
GO:0005666	Cellular Component	RNA polymerase III complex	Interproscan
GO:0032549	Molecular Function	ribonucleoside binding	Interproscan