Detailed information of agem_s0218.g4.t1 in Acropora gemmifera

Genomic Location: sc0000218_pilon:159606...180588
NR annotation: XP_015764631.1, PREDICTED: semaphorin-5A-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P283Semaphorin-5B OS=Homo sapiens OX=9606 GN=SEMA5B PE=1 SV=4
Q9VTT0Semaphorin 5c OS=Drosophila melanogaster OX=7227 GN=Sema5c PE=1 SV=3
O75326Semaphorin-7A OS=Homo sapiens OX=9606 GN=SEMA7A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01437PSIPlexin repeatFamilyInterproscan
PF01403SemaSema domainRepeatInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001627DomainSema domainInterproscan
IPR016201DomainPSI domainInterproscan
IPR027231FamilySemaphorinInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan

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