Detailed information of agem_s0218.g9.t1 in Acropora gemmifera

Genomic Location: sc0000218_pilon:391936...426646
NR annotation: XP_029193745.2, semaphorin-5A-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60519Semaphorin-5B OS=Mus musculus OX=10090 GN=Sema5b PE=2 SV=2
Q09575Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
Q9NTN9Semaphorin-4G OS=Homo sapiens OX=9606 GN=SEMA4G PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF01403SemaSema domainRepeatInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01437PSIPlexin repeatFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001627DomainSema domainInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR016201DomainPSI domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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