Genomic Location: sc0000219_pilon:403656...433340
NR annotation: XP_044177506.1, helicase SKI2W-like [Acropora millepora]
| CDS | ||||
| agem_s0219.g24.t3 | ||||
| Transcript |
| agem_s0219.g24.t3 |
| Protein |
| agem_s0219.g24.t3 |
| Uniprot term | Description |
|---|---|
| Q6NZR5 | Superkiller complex protein 2 OS=Mus musculus OX=10090 GN=Skic2 PE=2 SV=1 |
| Q15477 | Superkiller complex protein 2 OS=Homo sapiens OX=9606 GN=SKIC2 PE=1 SV=3 |
| O59801 | Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC550.03c PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF21408 | MTR4-like_stalk | Exosome RNA helicase MTR4-like, stalk | Domain | Interproscan |
| PF17911 | Ski2_N | Ski2 N-terminal region | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016438 | Family | ATP-dependent RNA helicase SKI2-like | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR050699 | Family | RNA/DNA Helicase | Interproscan |
| IPR048392 | Domain | Exosome RNA helicase MTR4-like, stalk | Interproscan |
| IPR040801 | Domain | Ski2, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12131 | ATP-DEPENDENT RNA AND DNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0055087 | Cellular Component | Ski complex | Interproscan |
| GO:0070478 | Biological Process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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