Gene detail

Detailed information of agem_s0237.g4.t1 in Acropora gemmifera

Genomic Location: sc0000237_pilon:41785...47575
NR annotation: XP_029191819.2, forkhead box protein K1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0237.g4.t1

CCAAATTTGGCCTTTTTTGTTCTCTGAGATGCCCGTATGTTTCTCCTCGTGTTGTTGTTTTGCTTTTGATCGACGGTGCAGCGCAAGGGGATTTGGATAGCGATGTCTTCGCCAACTCAAGATCAGGAGAGCGATGCCTTAGCATTGCTAGCTTTGAAGGCTGGCACTGTTGATACTGCGATGCAGTTTTGGTCTGGGGTAAATACTGTTACGCCCATAGCGAAACTTGAAGGACGCGAGTTCGAATATTTGGTTCGACAGAACAGGATTATCATCGGTCGAAACAGCAGTCTTGGTAGTGTAGACGTCAACATGGGACACTCTAGTTTCGTATCAAGAAAGCACTTGCAGTTGAGATACGAAAATCAGGATTTCTATCTTAGCTGCAACGGGAAGAACGGGATATTCGTCGACGGCACTTTCCACAGGCGAGGAGCACCTCCGCTCAAATTACCAGATGTCTGTGTTTTGCGATTCCCGTCCACAAACGTAAAAGTTCGGTTTACGTCGTTAGTAAGTGACGAGACCCCTAAACGTGTGCCGAGTCCACCTCGAACAAAAATTCCTCCACCACTACGGATAAACATCCCTCAATCAGATTCTACGTTTGTCTCGCCTGTTCCTTCTCCAACGGGGACGATAAGTGTACCTAATTCCTGTCCAACAAGTCCCAGAGGAGATTCCAACAACTCTTATGCTCCTAACTTGCATGCTGTTGCGGAATTAGCTGCTCAAGACGCCCAAGCAATAGCTGAGGAGGAAAAATCCAATGCAACTGTGGCAGGAGATGGAGGAAATAAGGATGATGGAAAGCCACCATTTTCTTACGCTCAGCTTATAGTTCAAGCTATCCTTTCTGCGCATGACAAGCAGTTGACTTTGAGTGGTATTTACACCCACATCACTAAAAACTATCCATATTACCGCAGTGCTGACAAAGGCTGGCAGAACTCAATTCGTCACAACTTGTCCTTGAACCGATATTTTGTGAAAGTGCCCCGTGCGCAGGATGAGCCAGGAAAAGGTTCTTTTTGGCGCATTGACCCTTCATGTGAACAGAAGCTGGCTGAACAAGCCTTTCGTAAGCGGCGGCAGAGAGGAGTGCCATGTTTCCGCCCACCATTTTCCCAGTTGTCCTGCAGATCCGCCCCAGCATCTCCAACTCATGGCCTTCAGTTTCATGTCCCTTCAGCACCTGTTAGTAATGTGGCACGTGAGAATTCTCCTACCAAGACAGTTGCACAGGCTGCTGATGGACTGCTGTTGTCACAAGTGAAACCAACTCCAACATCGCCTCCCACCATTCCACCATCTGGACTTCCACCTCCAATGCCTACCTTTTCACAGGGGTTTGTTAAAGCAGCAATTCCACTCCAGATGACAGGGGCCTCTGGGATGGCTGGGGCCCCCTTGGCTGTTAGCGTTATCAAGTCATCCCTAACTGCAGTGAAGGAAAATAATGGATCCGAAGTGGAGAGGAATGGGTTTTCTCAGTCATCTGGGGAGGAATCTCCAGTGGAGACAACACCGCAACTTGAATCAAAAGTTGTTTTAGTCAACAAACCGTCAGTTTCACAAGTAGTGAAGCAAAATCTGATAGCTGGGGGTGCAGTTCCAAGTTCAGGCGGCCTTCTTACTCCCATCCCTACCCCCACAGCTGTGTCACCCACAGGTACAACACAAGAAGCTGCCACCAAGCCTCAAATGCAAAAGGTACCCAACCCCTTACCACTTCCCTCAGTGACAACTGCAACCCTCACCCCTGAATCGTCTCCCCTTGGGGTACTGTCACCAGCTGCCACTACTGCAGCAGTTTCCATGGCAATGAATGGTGCTAAGCGAATGTTGAGTTCTTGTCATGGGCCAGGCATTGCTGATACAGAACCAGAAGTCAAGCGTCAAAAATTATTGCAGCAGCAAAATATTATGTGGTCAAACAACCAGACAGAGACTTCACATCAAGATAAACTCTAGCTTTTAATTAAGAAGATTCACCGACTTCATTACATTTGCCAGGGCTTTTCTTGAACAACATCTTTGGAAATAAGCTCCATGGTGGGCAGTTTGTTGTTATGGAACACAAAAAGCAAGGCTAAAAGTTGTTGCTTGCAGAGGGTTGCTCAAAGCATCAGATTTGAAGCCTCCATGACTGTGCACTGGTTTGAGAAAGGATCTAAATGATATTCAAATTTGCCATTATCCACATTACAAGATATCACCAGGATTGAGGAGCATTTTCAATATATTGCAGAGCAATGTGTTAAAGTTCTTCATACTGAAAGCAATGATACATGGGGACTAAGACAAAAAGTAAAACGACAAAGAAACAGACAGTGTCAGGGCATGTTGATGTAAGAGTAGAGCCACTAATTGTGGAATTAAAAAAGAGAAAATGCATGATATCAATTCAAATATACCAGGAAATTGCAGATGGGATTTTGATTATGAGTTTATTATTTTTGATTGGCATTGAATTTGGGTCTTCCGGAGCATGATATTTATGCACAAAGTAGGCTGGATCTACGTAATGTTTATGGGAATTGGTTAGATCTTAAGTTATTGCTAATACTGGTAGGTGCATTAGTTTTCCTTCAACTCATGGAGACATTCAAGAGATTTCTAAAAATTTAGTGAGAAGCCTTTGTAAATTGATACAATAATTATGCTGGGCAATATTAGGTCGGAGTTTATGGCACATTGTTCCTTATTATGGTCTCTGGGTTATTAATGTCAGGTAAGTTAAACACTTATTTCACAGCTTGAAAAAAAAGGAACTTTTTTGGGTGATCATGACAAGGCTTGCAACACTGCAAGTTACTGTCATGAAACTTCAATATGTGCTGCCCTGTTCCCAGCTTATTGTTTTACTGGAGTTATCAACAATTTGTGGCCAGAGTTTCAGCAAGTAAAGAGGTAAATGTTTAGATTGCATGCTAGAATTAAAGAGGAAAGGATGAAAATGGTTCTTTTGGTCCTTCATAAGTAATTCACATTTGACTTTGTGCCTCAAATTTGAAAGTCATTTGACAAAAACTAGCTGCTTGGCATTTTGCAAACAAACCTGCTAATTCAAC

Protein

Uniprot

Gene family

Uniprot term	Description
P42128	Forkhead box protein K1 OS=Mus musculus OX=10090 GN=Foxk1 PE=1 SV=2
P85037	Forkhead box protein K1 OS=Homo sapiens OX=9606 GN=FOXK1 PE=1 SV=1
Q7ZX03	Forkhead box protein K2 OS=Xenopus laevis OX=8355 GN=foxk2 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	Fork_head

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF00250	Forkhead	Forkhead domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR001766	Domain	Fork head domain	Interproscan
IPR018122	Conserved_site	Fork head domain conserved site1	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR030456	Conserved_site	Fork head domain conserved site 2	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45881	CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09404	FOXK; forkhead box protein K	-	Chromosome and associated proteins	ko03036	deepkoala