Gene detail

Detailed information of agem_s0260.g10.t1 in Acropora gemmifera

Genomic Location: sc0000260_pilon:299196...310484
NR annotation: XP_015770880.1, PREDICTED: kinetochore protein Nuf2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0260.g10.t1

CGCCATTTCGTGTCTGGCTCAAATTTGTGCATTTTCCTCCTCGAGTCTATCGTCTTACCAAGTTGATATGGCTTCAGATAAACAAGGATTTCCAATTCTAACCAGCGAGGAAGCCGTGGAAAGTTGCAAGTCTATGTTTGGGGTTGCAATGAGCGTAGATGATATTTTACGACCTTCGTATCAACAGATGAGGCGCCTTTATGTCACAGTGCTGGCAAGCTTTGGAGTTCCCACTGAACAGTTCGCACAGCCACAGTTCAAATTCATGGACAGCTTTGAACACCCTGAACTTCATGGAGACAGTGCTCCGCTTGTCATTTTGGCTCTTGCCATTGCTCGAGAACCAAAAAAGACTCTCCAGTGCATAAGTGCTATCGTCAACTTTACCAAATTCAAAAGCAGCAGAGAGTATGTGTACGATAGTGCAATGTCCGAGGTGGATGCAGCAGGGCAACAAAGGGAACAGTTAATGGCTCGAAATAAAGAACTCTGTAGAAAAATTCGGGACCTTAAAGCAAAAAGAGCCGAGGAAGATCAACAGGTTCAGATGTTTGAAAATGAAATTCAGGGCATCCAAAGTGATGTGAGTGATCTTAACAAGCAACAGGCAGCAGAAATGAAAAGTATTCAACAACTGAAAACGTCCAATGCAGAATTGAGCTCCAAAAAGGCTGAAATAAAGGCAAACTTAGCTGGACTTAAGCAAGATGGTGACAGCTTGAAGTCAAAGATTGTGCAGTCACCTGAAAGATTTCGAGGGGAATTGAACCGCCTCACAAGTACTTTGCAGTCTGTAAGAGAAGCAAGAGATGAACGAAGCGTCCGACTTCAGGAAATATGTGCTCAACAAGAAAGCAGTTTACAGATAAATGAGGATGCTCAAACTGCACTAAAAATGATCACAGCAACAGGGCATGACATGGACAAGCTGCGTGAGGAGACCACCAAGCTCGAGGACCTCCAAGACAAGAATTTAACTCAAAAGGAGATGCTGAGAGACCTGACAGCAAAGATTGAGCAACTGCGTCGGCAACTTGCATCGAAGCAGGAGAAGCTGTCTCGGCTGATGCGGCAACACGACAAAAAAGTGGCAGCAACTCATGACGCAAGTGGTCAATTGCAGAGGGAGCAAACATTTCTGGAGCAAAAGATGACAGAGAAGGAAGAGTACCTGCAGAAGCTTACCAAGCAGATCAACAGCCTCTCACTGACGATCCAGGAGGAGGAGACAAGACATGACGAAGAGATGGACTCACTGCGTAGCTTGTACCAACAAATGCTTGTACAGCTGGAAAGCTATCACCAAGGACTCAACCGGGGCTGGAGTAAAGTCTCGACTGCCACAAGCAAACGAACCAAAGACGATAGCAAGTCTGATGGGTGACTAGTAACCGATGCATGCCGAGGTTTTACGCAAGAAAAAGATGATTCGCGATAGTTTGCATACGAGGTTCACTAACTTTTTTGGAAGGAGAAACTTCTCAGCAACAGTTTTCGCAATATTAGTGTTGGTGTGATGGGTGACGAAAAGAAGAAAAAAATCGTTAGCTCCCTCCCGAAAGCACCGACAAAACTGCAGTTAAGGTTTCTTTGTCGTTTTTGACTCTGAGATTAACGTTAAAGTAAGTAAACAATTGAAAAGACGGGAAAAGGTCGAAAAAAAGGGATCTTTCCCCTAATTTGTCATGTCTTATTGTGAAGCCACTTGACTTGCAGTAAAGACTCCGGGTGGATTGATTTGTCCTCCAATCATTGAACTTGTTTTCTTTCCTGTTCTGATCTGTTTTATTTCACGAGGGCATTCGAGTTGTTGCACGGACGTGACACGTGATTTGAATTCTTCGTGCTGCTTACAGAAAGTCTTTGTTAGAGTCTTTTAATCCGCTCGTTGAATATTCCTTTCTTTCGAAAACCTATCATTTTGTGGACGTGAACATTAATTAATTTATCTGTCGTAAGTTATCTGGGATATAATTGACCACAAATGGACAAATCACGCAGAAACTTAAATTTTCCGCCAACCACTTTCTAATCCTTTCACTGACAACTCTAGTTTAAACGTTTTGTTTATTGGTACTCTTTTGCATTGTCCAGGACGTGCTAATTCGTTGTTTATAACAAATGATGCAACAATTGTCTCGCGCCTTCCATTATTAAACAATGGAGTTGAAGCCAGAATTGTTACGTAACCTTCATTTCGTCCCGTAAAAAGCATTATTTTCATAATTGTGACTGCCTTGGGGTCGAAATAATTGCAGTTTAGATTCGCACTATAATTTCTTTGGTTGTAATTTGGGTTCCAACACCGTTACTAACTTTGCAGTCATTTTATTAGGCATTCTGTTTAGGAAATGGCGTAGCTCAGCTGTTTTGCTTACCAAATTGTACATAGCATCAGTAACGACATAAAGCGATTCCATTGCCTCTTACTGTTTGCACTTTTTCATCCGTTAGCAACTACAAGTCGGGCCAAACAACAGCAGTAGTTAGTCGGCGTAGGTTAATAAAAATGTTTTGAGCTTATATTTTCAAGTGCAGTGTTGTTTAAGCTTCAAAGGACTTGGTTGACTTCCCAAATCGGAACCAGCCGCTTTCCTTTTTCGCCGGGTCATTTTTTGCCCACACATTTTTCAGCTTTTAATTTCTTTGAGATGCTGTGGTGTGAAGCTATTTTCCTGAAGTTTAATTCATTGGCATCTTGCTGGCTACGAAGAAACCTCATGCTAAAATTGTACGCCGATAAGCTCTTTGAATTCGCCTTTCAATAAACAATAGTGTGGGGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18595	Nuf2_DHR10-like	Nuf2, DHR10-like domain	Domain	Interproscan
PF03800	Nuf2	Nuf2 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041112	Domain	Nuf2, DHR10-like domain	Interproscan
IPR005549	Domain	Kinetochore protein Nuf2, N-terminal	Interproscan
IPR038275	Homologous_superfamily	Nuf2, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0000776	Cellular Component	kinetochore	Interproscan
GO:0031262	Cellular Component	Ndc80 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11548	NUF2, CDCA1; kinetochore protein Nuf2	-	Chromosome and associated proteins	ko03036	deepkoala