Detailed information of agem_s0261.g15.t2 in Acropora gemmifera

Genomic Location: sc0000261_pilon:215372...222095
NR annotation: XP_029186062.2, survival motor neuron protein-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O18870Survival motor neuron protein OS=Bos taurus OX=9913 GN=SMN1 PE=2 SV=2
Q8HYB8Survival of motor neuron protein OS=Felis catus OX=9685 GN=SMN1 PE=2 SV=1
Q4R4F8Survival motor neuron protein OS=Macaca fascicularis OX=9541 GN=SMN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20635SMN_YG-boxSurvival Motor Neuron, YG-boxDomainInterproscan
PF06003SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan
PF20636SMN_G2-BDSurvival Motor Neuron, Gemin2-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047313DomainSurvival motor neuron protein, C-terminal oligomerization domainInterproscan
IPR002999DomainTudor domainInterproscan
IPR047298DomainSurvival motor neuron protein, Tudor domain, eumetazoaInterproscan
IPR040424FamilySMN complex subunit Smn1Interproscan
IPR010304DomainSurvival motor neuron, Tudor domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR39267SURVIVAL MOTOR NEURON-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13129SMN; survival motor neuron protein-Spliceosomeko03041deepkoala

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