Gene detail

Detailed information of agem_s0271.g3.t2 in Acropora gemmifera

Genomic Location: sc0000271_pilon:83023...100695
NR annotation: XP_015748650.1, PREDICTED: microfibril-associated glycoprotein 4-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P19477	Fibrinogen-like protein A OS=Apostichopus parvimensis OX=1902835 PE=2 SV=1
Q29042	Ficolin-1 OS=Sus scrofa OX=9823 GN=FCN1 PE=1 SV=1
Q9WTS8	Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF14772	NYD-SP28	Sperm tail	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR039505	Domain	Dynein regulatory complex protein 1/2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan