Detailed information of agem_s0283.g14.t1 in Acropora gemmifera

Genomic Location: sc0000283_pilon:168366...172708
NR annotation: XP_015774620.1, PREDICTED: E3 ubiquitin-protein ligase Hakai-like [Acropora digitifera]
Species abbreviation AGEMM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
M9PBE2E3 ubiquitin-protein ligase Hakai OS=Drosophila melanogaster OX=7227 GN=Hakai PE=1 SV=1
Q4R7I8E3 ubiquitin-protein ligase Hakai OS=Macaca fascicularis OX=9541 GN=CBLL1 PE=2 SV=1
Q75N03E3 ubiquitin-protein ligase Hakai OS=Homo sapiens OX=9606 GN=CBLL1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006135 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18408
all species →		zf_HakaiC2H2 Hakai zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR041042
all species →		DomainHakai, C2H2 zinc finger domainInterproscan
IPR040383
all species →		FamilyE3 ubiquitin-protein ligase HAKAI/CBLL2Interproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR040380
all species →		DomainHAKAI-like, RING finger, HC subclassInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13480
all species →		E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0030155
all species →		Biological Processregulation of cell adhesionInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15685CBLL1; E3 ubiquitin-protein ligase HakaiEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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