Gene detail

Detailed information of agem_s0321.g2.t1 in Acropora gemmifera

Genomic Location: sc0000321_pilon:25936...31430
NR annotation: XP_029185078.2, heparan sulfate 2-O-sulfotransferase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0321.g2.t1

ACGAAAAAGTCGCGGGTGGATGTTTTGTTCAAGGCTCATCTCAATTATCACGAGAATGATCGTAAACAAATGCATAGTAGTCTGTTTTTTTATTGCGCTGGTTATTCTTGAAGTCCAAATTTTGCGTTCGAATGCTCCTTCGCAAAACCAACGTGAAAACGACCAAACCAATCTTTTGCAAGTTGATCCTTTGAGATTGAGGGGCTTGTCATTCAGCAACATGCAAAAGTCTTCCATTGAAGAAGCATCTGAATCAAGAAGACAAATTGAAGATGATGATGACTTAGTGATTTTTTATAATAGAGTCCCTAAAACAGGAAGCACATCTTTTGTGGGTGTTGTTTATGACCTTTGTGGCAGAAACAAGTTCCATGCCATTCATCTGAATGTATCACGCAATATGCATGTGATGTCGGTACCTGATCAAATGCTTTTTGCTTACAACATAACATCATGGTGGCGAAAGATGCCTGCAGTTTATCATGGACACCTTGCCTATGTTGAATTTGAAAGATTTTCTCTGAGAAACAGACCACTGTACATTAACATTGTTCGGAAGCCTCTGGACAGACTTGTGTCATATTATTACTTCTTAAGGTTTGGTGATACTTTTAGACCTTATCTTCGGAGAAATAAGCAAGGAGACAAAGAGACATTTGATGAATGCGTGCAAAGAGGGAACCCAGATTGCAAACCTGAAAAACTTTGGCTTCAAATCCCTTTTTTCTGTGGCCATGCACCGCAGTGCTGGTCTCCTGGAAACAAGTGGGCGTTGGAGCATGCGAAACGAAATTTAGTTGAAAAGTACTTATTGGTAGGAATAACTGAGGAAATTGGTGATTTTATTGCCATTTTAGAAGCCACTGTTCCAAGGATATTTAAAGGGGCGACAAAATTATTTACGGAGGGTGGAAAGTCGCATCTTCGAAAAACAGCATCAAAAAAACCATTGGAGCGAGCAACAATAGAGCACTTTGAGCAGTCAAAAATATGGAAAATGGAAAATGAATTTTACGAATTCGCGAATAAGGTGTTTCAAACCGCCAAAAAGAGAGCGCTGACGACAAGGAGAGGGATGCTGGAAGCCTTACCACAACAATTTTTCTACGAAAAAATAAGACCGAAAAATGCGAAATAAATTTTTTGCTAAATGACAGAATTTTTTTATAATTCTCTCAAAGGTATAAAAAGGTACAAAATAGACTTATTCATACTGGCGGCCCAAATTTAAGAGATTATGTCCGGTGCCGCTGCGATCAGCAAAATTCAAAACAATTTTTTTAAAGGGCAAGAGGCCGGTTAGGGTGCAAGTAGCATAaaggcctggctaaactaggaaacattgttgcggaaacaatgtttgttgttatgtttctcgggttggctaaactgggaaacatatgtttcggacgcaaaatttgtgtccgggaagcaaaaatgtttttgactccaggcaaaaacattttttgtttctgagcagcaaaatttgtttccgcaacaaatgtttcccgcgcggctaaatttggaaacatttgcatccgcaacaatgtttcagcaacaatgtttcctagtttagccaggccttAAGGATAATATGTAGACCGCCTTATCTGAAAGCTATCTGTAATTATACCACTACATGCTAAGGGCGTAGCTAGCTTTTTGACTTGTTGTAGGCCAGTAAGAAATTTTCCCAAGCAATTTGAGGTGTCTTCCAAAATACTACTGTGAAAAGTCAGTTTGGCGGAAAAAAAAAAAGTGTAGGCCCGTGCATACGAGCCTACAGGCTGTCTACGCCCCCTCATGCAATCACGGAAAGACAGCAACCAAGAAAACCTAACGTACATGAAAACAAGTCTAGCGCCCGGCGAGGTCGTATAATTCGGTTCTCATGTTGCGAAGCTAAAACAGACTTGACGAGGTGAAACATAACGGCAAGTAATTTCTTGAGAGCCTATCCTGTACTTGCAGTACTAGCAAGGCATTCTTTGCAAGGCATTCTTTATTTTCTTGGTCCTTTCATTTTGTGCAAGAGTGGCATATATAGCGAGAACTAGTCGCCTCGCTTTCTTAAGTTAAGTTGATTTCAAGTTTATTGTTAATTTGCTTAAGCCTGGCTTTCACTAGCGACGCATTCACAAGCCGGCAAGCATAACCGCAAGCA

Protein

Uniprot

Uniprot term	Description
Q76KB1	Heparan sulfate 2-O-sulfotransferase 1 OS=Gallus gallus OX=9031 GN=HS2ST1 PE=1 SV=1
Q5R621	Heparan sulfate 2-O-sulfotransferase 1 OS=Pongo abelii OX=9601 GN=HS2ST1 PE=2 SV=1
Q7LGA3	Heparan sulfate 2-O-sulfotransferase 1 OS=Homo sapiens OX=9606 GN=HS2ST1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03567	Sulfotransfer_2	Sulfotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005331	Family	Sulfotransferase	Interproscan
IPR007734	Family	Heparan sulphate 2-O-sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12129	HEPARAN SULFATE 2-O-SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004394	Molecular Function	heparan sulfate 2-O-sulfotransferase activity	Interproscan
GO:0015014	Biological Process	heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process	Interproscan
GO:0015015	Biological Process	heparan sulfate proteoglycan biosynthetic process, enzymatic modification	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02513	HS2ST1; heparan sulfate 2-O-sulfotransferase HS2ST1	EC:2.8.2.-	Glycosyltransferases	ko01003	deepkoala