Detailed information of agem_s0371.g6.t2 in Acropora gemmifera

Genomic Location: sc0000371_pilon:73295...108625
NR annotation: XP_044178011.1, 5'-3' exoribonuclease 1-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
P403835'-3' exoribonuclease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=exo2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17846XRN_MXrn1 helical domainDomainInterproscan
PF18334XRN1_D2_D3Exoribonuclease Xrn1 D2/D3 domainDomainInterproscan
PF03159XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan
PF18332XRN1_D1Exoribonuclease Xrn1 D1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041412DomainXrn1, helical domainInterproscan
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR041106DomainExoribonuclease Xrn1, D2/D3 domainInterproscan
IPR047007Homologous_superfamily5'-3' exoribonuclease 1, D1 domain superfamilyInterproscan
IPR004859DomainXrn1, N-terminalInterproscan
IPR040992Domain5'-3' exoribonuclease 1, D1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR123415'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004527Molecular Functionexonuclease activityInterproscan

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