Detailed information of agem_s0502.g2.t1 in Acropora gemmifera

Genomic Location: sc0000502_pilon:47342...65755
NR annotation: XP_044168066.1, tetratricopeptide repeat protein 28-like, partial [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BG58Transmembrane prolyl 4-hydroxylase OS=Mus musculus OX=10090 GN=P4htm PE=1 SV=1
Q9NXG6Transmembrane prolyl 4-hydroxylase OS=Homo sapiens OX=9606 GN=P4HTM PE=1 SV=2
Q6IR34G-protein-signaling modulator 1 OS=Mus musculus OX=10090 GN=Gpsm1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13176TPR_7Tetratricopeptide repeatRepeatInterproscan
PF12770CHATCHAT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052699FamilyRegulatory & Mitotic Spindle AssociatedInterproscan
IPR024983DomainCHAT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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