Gene detail

Detailed information of agem_s0567.g2.t1 in Acropora gemmifera

Genomic Location: sc0000567_pilon:35886...39349
NR annotation: XP_044170937.1, uncharacterized protein LOC122955262 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0567.g2.t1

AATCCATCACTTGTCCTTTCCCAAGGGGTCTTCAGTTAATGCTGGGATACCTCTTGAACACTCCCGTGTGTGCTATGCAACCATAGGGGATGCCATCAACCACATTAAAGCTGTAGGAACAGGTGCTTATTTGGCTAGGACCGATATAAAAAGTGCTTTCCGTATTTTACCCATAAACCCCATTGACTATGGCTTGCTGGGAATGAAATGGAAGAATAAGTATTATTATGACCGTTGCATGCCCATGGGTTGTTCCAGCTCTtgcaaaacttttgagacaatcagttctgctcttgagtggattgctagaactaaatttaaaatacaacatgtgttgcatttatttgatgattttttattcattgctcaatcagagcgcctttgtcagcaacaattgaacatttttctgcaattctgttcgtacttgggagttcccatagcaccagaaaagacttttggcccatcgacaactctttcttttgttggtattgaattggatactgttttgaaggaggcaaggttgccacaggataagctagataagtgtgttacgactatcttagaatttcggcaccgcaaaaaggtcacccttcctgagttgcagtcactgattgggctcttaaacattgcatgctcagttatacagccagatcgagccttttgcgtcgccttattgatttgaccattggcatcaaattgccttctcacaaaatccgactcaatcgagaggttaaaaaagaccttgatctttggctgaaattcttgcaagatttcaatggcaaatctttcttttcagatgatgattggctttcgtctagcaaacttaatttgtaaacagatgcttcaggagctcatggttttggtgcagtatttggtagtcactggtgttttgggaaatggcccaatgattgggcttaccgtaatattgccatcttggaactctatcctatttagtctttacctgtggggtcatgctatgtctaataaacatgtgctgtttttcactgataacaatgccttagtccatgttatcaacaagcagtcttgcaaggacaaagatttgatgttctttgttcgaaagcttgtccgggcatgcttgcgatacaagattgttttcaaggctaaacatattgcgggcgtcaataacatcttagcagatgctttatcccggttacagatgctaaaaggatataggaagaagggacaacgtgttgatacaagattaccgattacattgcccattcttcataaacttgttgattcggctgagagcttttcttgcccaaattataccaaagttcagtcccgtgccatgtgctcattggctctctttgcatttctccgggttggtgagatgacCGCACCCAATAAGGGACCGTGTCCCCCTATTGATTCTACAGGAAAGATTGTGTCACTAAAACTTGCTTTCGCTGATTACAAACACAATTATAATAGGCACCCTTTCAACTGCCAGCCATCTCATTGCCCAGTTGAGTCTTTGTTACTTTACTTAAAGCACAGGGGTCCCATGCCCGGCCCCCTTTTCATTGATTGTGGAAAACCCATCATCCGTAATATCTTTCTTGAACAGATTTCGTGggctgtgaaatcttgcggtcttgactcctctcgatataaaggtcacagttttcgtattggtgctgcctcttatgctgcagacaggggattgtcagattctcaaattcgcactctggggcgatggccatccaatgcatttactaaatatatcaggattccttctttgtctacttaattTAGTTGATCTGCATTAATTTAATTTTGCATTCTTATCTTAATAATTTATAGAGTAAATTGGCTGATTTACAGGGGTGATCAGTCACTTATCTCTCTGATATCTTAGCACTTCACGTCATATTCATAAATATTTAAAATGCACTCTATATGATATTCTTTAATATTAGTGACTTTATTGACTGCTTGACAGGGGTGATCAGTCTTATCTCTAGGGTCAATGTAATCACTTCAATGTAAGGGTTGATCTGGGGTGGCACCACTACTATCTGATGTTTTGGTACTTCTAAAGTAGTATCTTCTGTTAATTTGTCCAAATCAAATAATTTTCTTATGATACATGTTCTGGTTACATAATTGAGCTGTTAGCAGGGGTGACAGTCTCATGTTTGTCCTCTTGTATATTGTTAATTTGAATTTACTCATTCGATTTTCGATTATGTAACACTGTTAAACATGACATGGACACGAGATTAGGGAGTTCATTCAATAGCGTGTTTATGGCTTAGTGACCTGGCATCAAGTCAGCATCATTATTCGCTAATCTTCTTCAAGCGCAGACATGTTTCATATTTCCCACCGCCTCCCCGTTCACCTGTCCATGTTTTCATTTCATTTGGCATTGTGTGGCGAGCGAGTAATTTGCCCTCACCTTCACTGGGCAGTAGCCACTATTCTCTTTATCAGAATTTCAAACAATTTCTTGTATTTAAATTTACTTATCGTGATTAAAGCACGGCTGTAGGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR052925	Family	Phage Integrase-like Recombinase	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34605	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan