Gene detail

Detailed information of agem_s0973.g1.t3 in Acropora gemmifera

Genomic Location: sc0000973_pilon:354...18976
NR annotation: XP_044178859.1, LOW QUALITY PROTEIN: protein crumbs homolog 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A1Z9G2	Pre-mRNA-splicing factor syf1 homolog OS=Drosophila melanogaster OX=7227 GN=fand PE=1 SV=1
Q9DCD2	Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1
Q9HCS7	Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan