Detailed information of agem_s1946.g1.t1 in Acropora gemmifera

Genomic Location: sc0001946_pilon:1...5375
NR annotation: XP_029214205.1, E3 ubiquitin-protein transferase MAEA-like isoform X2 [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GR10E3 ubiquitin-protein transferase MAEA OS=Xenopus laevis OX=8355 GN=maea PE=2 SV=2
Q5F398E3 ubiquitin-protein transferase MAEA OS=Gallus gallus OX=9031 GN=MAEA PE=2 SV=1
Q7SXR3E3 ubiquitin-protein transferase MAEA OS=Danio rerio OX=7955 GN=maea PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007028 (this species only)

 Pfam domain
No Pfam domain signature was detected for agem_s1946.g1.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR045098
all species →		FamilyFyv10 familyInterproscan
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12170
all species →		MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0034657
all species →		Cellular ComponentGID complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for agem_s1946.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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