Gene detail

Detailed information of ahya_s0001.g440.t1 in Acropora hyacinthus

Genomic Location: sc0000001_pilon:4873603...4880404
NR annotation: XP_029191026.2, uncharacterized protein LOC114957691 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0001.g440.t1

AAAATGGCTACCTCTGTGGATGTTGTAGAGGGAAGTTTTGAAGAGGAAATTGAGCTTTTGGAGGCCATTTATATCCACGAATTAACCGTTGAAGGACCGCGCGAAAGACCTACTTGTGTGAGTGTGTCACTTCATCCAAGCACAGCAGATGAGGAACACAAACGCTTTGTTTGTCTTACATTAGTGCTTTTCCTTCCCGAGAAGTACCCTCATGATTTGCCATCCATTCATGTCAAGACTCCCAGAGGATTGTCCGAAGCCCATGTTATCAGCATTTTGTCAAACCTTAAAGAACTTGCAGTAACCTGCCTTGGAAGACCTATGCTCTATGAGCTCATTGAGTACGCCAAAGAATGTCTTACAGATAACAATGTACCCAGTTGTGTTTGCGCTATTTGTCTCTGCCACTTTCAGGACACCCATGAATTCACTAAGACAGATTGCTATCATTACTTTCATTGTGACTGTTTGGCAAGGTACATTCAATTCTCACGTGAACAAGAGAAAACAGAAGAAGACAAGGATAGGGTAAGGTTGAATGTCCTATGTGTAGACTTCCCATCAACTTCAACCTCACTGAACTGCAGACAGTGGCCTCACACATGGTCACCGAAGATCAGTTCATTTATAGTCCCAGTGAAGAAATGTTTGAACTTCAGAAGAAAATGGCCGCCTTATTTGAAAAGCAAAAGCTGAAAGGGGGAATCATTGACATTGAAGGAGAACGAAATCGATATTTAATCGATATTACATCGGTTCGTCAAGGGGAGAGTTTGGAAAGCTCGCTACCCACAGGACCCGATATAGACACCTTAAAAATGAGCCTTCTAACAGACCGTACAAGCAAGACTCCTAAAGGGTATGGCAAAAGTGACCATTTCTATGAATCAACTAAATCCAATACGGAAGGCAAGGATGAAAGAGAGTTTTTCAAAAGCTCCCCTCCAGCTTTAGAGAAACCAAAAAACAAAACTGACGGTGAAAGGTTGAAGTATAGAAGAGTTTCTAGGTCGGAGAAGACGAAGGTATCAGGGGATGAGAGACCTCGGGGAACAGGAAACACTGCCAGGGTAAATCTCGATGTGAAAGAATCAGATTCGCTTGCAGAGGTGGTGGGTCCATGTGTGGACGGCAAACAGGAGAATGGCCGAGCAAAGAGTAAATTGGAGAAGAAGAGTTTGTCCATGGATGAGACACCAAAGTGTATACCGAAGACAGTCTCGGTAAGTTTTGATTCAGACAAATCGGATTTGCCCGAAAAGGAGGTTAGTCAGAACGGGAACGCCAAAAAGGGGAGTCACCTTGAAGAAATCGGACCAAGGCAAGGGATTGTTCGAAGGAAGGAACGTGGTGTTGCTAGCGACAGCAGCGTAGCACCAGGTTCACATTACGAGAGACCTAGATCTGCAAGAAGATGGCGTGGAAAAAGTGGAAGAGGAAGAACATCATGTGAAAGAAAAAATGAATTTCGAGATAGTGGGAAGGATTCCAACAAAAATTCGCCACCATCTCAATCAGCTGTAAAACAAGTTAGAAAAGACAGATTAACAGAAGGGACGGAGCTCTCCCGACTTGACGATGGTGATAGTAGCTCCAGGAATGCTACTTCTTCAGTTGACAGCGTGAAAACTTCGAATAATCAGCCGCCAAAGGGTGCGATGCCCTCCAATCAGGACTATAATTGTTATTTTGGTCAAGGAAGGTCATTTAATAAGGAATGTCCAAGTACCAAGGGCAGGAGAAGTCCGCGGACCAATAAAAGCAAAGCTTTTATGCCTCCTCCGGGTTTTGAGAGAGTGGTGGCCAGTGCTGGGGGATGTGATCATTCTACAAACTATACCCCAGCACCTCCCTCAGGGGTTAACAAGGGTGTATCACAACACAGGCCTCCACCTGGACTAAGTACGACCGTGAAAGGAAAAGAACCTGGCAGGAACCCTGTGGTTCCAAGTCTAAGTCAAATATATACTTAGGCAAAATATAAATCTTGATGGAATCATCGCAATGTAACTGCCTGTGTCACAGGTTCTCGAGTCTATGAAGCCTTGAAGGCCAGGAATTAATTACTGTTGCAAATTTCATGATTTTGTTGCGGAAAGCTATGACAATAGATTGAAGCGTTTAAA

Protein

Uniprot

Uniprot term	Description
Q9QZR0	E3 ubiquitin-protein ligase RNF25 OS=Mus musculus OX=10090 GN=Rnf25 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR039133	Family	E3 ubiquitin-protein ligase RNF25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13198	RING FINGER PROTEIN 25	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0051092	Biological Process	positive regulation of NF-kappaB transcription factor activity	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan