Gene detail

Detailed information of ahya_s0011.g145.t1 in Acropora hyacinthus

Genomic Location: sc0000011_pilon:3374514...3382635
NR annotation: XP_015770288.1, PREDICTED: non-histone protein 10-like isoform X3 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q03435	Non-histone protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NHP10 PE=1 SV=1
P07156	High mobility group protein B1 (Fragment) OS=Cricetulus griseus OX=10029 GN=HMGB1 PE=1 SV=1
P10103	High mobility group protein B1 OS=Bos taurus OX=9913 GN=HMGB1 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050342	Family	High Mobility Group Box (HMGB)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301	Molecular Function	DNA binding, bending	Interproscan