Gene detail

Detailed information of ahya_s0015.g2.t1 in Acropora hyacinthus

Genomic Location: sc0000015_pilon:61971...84395
NR annotation: XP_015749114.1, PREDICTED: uncharacterized protein LOC107328850 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0015.g2.t1

CACACAATTCAAGCACTCCGGATAGACAAATTCCCAGACATTCATCTGGTTCTATTTCAACATGTTCTTTTGTCGGTCTGTCTGCAACAAGACCTTGGTTGTTAAAGATCTGGTGGTCGATAAGGATATTGATATCCTTGGTATCACTGAGACATGGCTGCACGGAAATGTTTTGGATAATCCTGTTTTGGCTGAACTTGTTCCTAGTGGTTACTCTTTTGGACACTCCGCCCGTCATGATAGTAGGGGTGGTGGCGTCGGTCTAATGTTTAAGAAATCTCTGAATGTAAAGTTTCCTGTGGCTGAAAGCTATAACTCTTTTGAGATGGTTAATGCTGAAATCAAACTCGCTGGTAAATCGATCAATTTATATGTGATCTACAGGTCTCCACCTTCAAGTGAAAATCGTGTTTCTTGTGAATCCTTCTTGGATGAATTTGGAACATTGTTGGAAAATTCTGTGATTGATCCTCGTCCCCTTCTCATTACAGGTGACTTCAACTTTCATGTTGATAATAAGTCTGACGTGGATGCCAATAATTTTTCCGATCTACTGGAATCATTCAATCTATGTCAACATGTAATGGAATCTACACATTGTGCTGGTCACACTCTCGATCTTATTATCTCAAGGAACTCTGAAAATATTCTTAATTCACTTAATGTTGTTGATGTACCAATATCTGACCACAGGCTTATAATCTGTTCCTTGGATCTCAAGAATCCACCTTTTGAAAAGAGGAGGATACAGTATCGTCAACTCAAATCTGTAAACTACGACAATTTCCGCAAGGATATTATGAACTCTCCTCTTGGCCCTGAAGTCCAACACGCGCCTGTCGATTCTTCAATGAATCCCTTTGAAGTTGCGTCACATCTCGTTGATTTGTATGATAATGTCTTGCTATCCCTCATTGATTCTTACGCTCCACTCAAGACGAAGACCATCATCCTTAGACCTAGAGCTGCATGGTATTCAAATGGCATTGCTGAATGCAAGAAACGAAGAAGACGATTGGAGCGCAAGTGGAGACGAACAAGGCTTCTTTGTGACCGAGTTAACTATGAGAAACAGTGTGCTCAGTGTAGAGATTTGATCTACAAAACTAAAAAGGACTATTTCAACACAGTCATCTCAGAGAATATACATGACGAAAGGGTTTTGTTCCAAACAGTCAACCATCTTCTAAGTGGTGGCATCAAGGATACTGAGTACCCCACTTGTTCTGATGATAAGACGCTAGCTGAAGTGTTTATTAATTTCTTTACATCTAAAATAAATGGCATTTTGTCGGATTTACAAAGATCTGGTACATCCGACACACTTGAAGTGAGCCCTCAGTGCAAAAGAAAAAGTTGCAGTGAGATCAAATCTTTCAGCCTTGAGGCCTcaagtggttcttataccatcgatcctgatggtgaaggaggctgtgaacccatcatcgtcttttgcaacatggccgataaaaatggagctggcgtgacagtgattggtcacaacagcgaagaaagaacgtcggtaaatggatttgctcagggagcttatggaaaaaagattgattactctggagtgaactcatcttgcatttctcagcttgtttccctaactgcagtatcttctcactgcgagcagtttatcaaatacgaatgccaccactctgttattctgttcaacgggaatccttatggctggtgggtgtcgcgagatggtgtaaaaatgaagtattggggtggagcaggacccacagattcatacaagtgcgcatgtggagtagctcggcagtgcgcagatcccagctatggctgcaactgtgacaaaaacgacaaggtgtggcgagaggacagcggttttatcagggaaaagtctcatctcccagtcatcgagctcagatttggagataccgaaggcctcaatgagaaaggctatcacactctcggtaaactcatatgttATGGAAATATTTAAGCGTTTCTCGTCGAAGAAAAACTTTCGGTTTTGAACCTCCACCTGCGACTTGTCTTTGAATGTGCTACCCAGAATCCGTCTTTGTCAGTGAGATAAATGAACTATGTTCATCACCCATTGAATACAATTAGGCTACTGGTAAATAATAAAAATAGAGAGAAATC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46670	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan