Detailed information of ahya_s0017.g163.t1 in Acropora hyacinthus

Genomic Location: sc0000017_pilon:2824308...2862909
NR annotation: XP_015762757.1, PREDICTED: macrophage receptor MARCO-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4A3R3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Sus scrofa OX=9823 GN=DMBT1 PE=2 SV=1
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000859DomainCUB domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR001190DomainSRCR domainInterproscan
IPR004099DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP