Gene detail

Detailed information of ahya_s0024.g22.t1 in Acropora hyacinthus

Genomic Location: sc0000024_pilon:1156989...1167632
NR annotation: XP_044176831.1, uncharacterized protein LOC122959547 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ahya_s0024.g22.t1

ATGCGAAGAGATATAGAAGCTCTCAAAGACCAAGCGAGGGAGAAGACAAGCCATGGCCAATTGAACGACTTGAGGGATTCGCCGGAACAACTGCACTTTGCCAATTCAAGGATTGACAGATTTCAAGAGGAATTGAAGCAGCCGAAAAAGGTTTCCATGTTGCATGACAGAAGTGTTGATTATGAGCAAAAGTCATCAAAACATGCTCCACCATCCTTGTTGGATATTTCCGATCTTGACAATGGAACCCATCAGGGTAGCTCTTCATTTCTCCCAGGGCAATCTGCATCATCTCTGAGCACATTCGCCATCATACAGCCAAAAAATGTGGAACCTGCAGACTCACAGAGTTGTCATTGCTTTGAACTGCAAGAAAGAGTGAATGAATTAGAGGAACAGGTTAGGAGGAAGGACGAAGAAATACAGCTTCTGAAAGCCAAACTTGATTCATTACCCAGAGCACCCATGAAGGATGAGAGCAGGCAGTATGCTGCCAATTCATCTCCCAATGAAACAAGTTTGCAAACAAGACTATTTTTTGAAGGAGCTGCTTTCAGTAGACAGCCAGAGATTGTTGCAATGCCACCAGCTTCTTCACTATTGAAAGATAAAAGTTTCAATTTACTCTCTGCAGACGACCAAAAAAAGAAAAATGGAACGCGTAGATCTGCCAGAGGTTGGACGCTCAGTGGTGAAGTAGATAGTAGAAGGATTTTGCGAAATCAAGAGGACAACTCGTATGCATCATTTTCATCTTTTAAGAGCTCAGCTGAGAATGACAGAGAGATTCCTGCCTCGAGGGGTACTGAGAATTATGAGGTTCTTCCACTAGAAAGAGTGAGAACCGACTCCAAAGGAGACACTCATGTTCCCTTCACCTCTGTTCAGGCTGGCCCATCGAGTATTTTGAGCAGCACGAGTAGTAATTCATCAAATTCGTTGGTTTCAAACGGCGCTGAAGGTGTGCAAATGCCTTGTTTAAGGGGCGGCTCGTCAGGTTCCTACGAAGTGAAACCAACTGAGAAGATCCAAGCAACCGGCTCTGAGTTTTCAGATGGGAACGCTGAACACGACAAAGGAACTGTACGAAGGGGTGAGGTTGATCCTGACAGTTCTTCCAAAACTGGAAATCAACTTTTGCTGCAGCGAAACTCAAACGAACATGATCAACGAAAAGAGGAAAGGCTTGAGCCTGGTTCTGATAGTTCTCCCTCAATTGGAAATCAATCTCAACTAACAGAGGGAAGCTGCAAGCCTGATACAACCAGTAACTTTTACAGAAAATGGGAAACCCAGGGCGCGCGACCAAAACTTACTCAACGTCCAGTGGATCCGCCACTGTGGCCAAGCGCTAGCCCTGTGTCCGAAGGTTTGGCACAAGATTCCTTACCTGGACAAACTGATGTCTCTTGGGTTAGGAATGGAATGTCGAGTGATGAAGTTAATACAAGTAATCGTCTTTTGCCCCCGAACGACTTTGGGACCAGCGATCACAGTCTCACAGGCGAGCAGGATTTTGGAAACGCTGTAAAGGCCAACGACAATCCACTCGCTGCACTCAGCGAAAAGGGAGAAGGGAAAAGAGGGGAGCAAGAGGCCAATAAATTGCAGGAGGCGGGGCCGTCGCAGCAGAAAGACGTTAGCACAGGCTCACAGCGGCTGTGTGAGCATTACGTGCGACGCTGTAGAGTGTGCTTCTCATGTTGCGAGGAATTCTATGCATGTCATATATGCCATAACAAGTCAACCAAATGTGAAAATGGCCAAGCCAAGCCAGGTGAGGCAACACACCTGAAGTGTTCTCTCTGCCAATTTGAACAGGCGATTGATCAAAGCAGTGGCGTATGCCTTGGATGCGGAGAAGAGATGGCGGAGTATTTCTGCTTCACTTGTAAGCTCTTCAAGAGCTCAGACAAGAACCCGTATCACTGTGATCAATGCGGAATCTGCCGGCTCTATAAGGACAAAAAATTCCACTGTGAAGTTTGCGGTGTGTGTATGGATAAGCGACTGGAGAATAAGCACAAATGCCGACCGGACTGTGGCCACGATGAATGCCCCATCTGCTTGGAGGATACTTTTCGTGGCTGTCTGAGTACGCCCTGTTCGCATAGGGTGCATCTGGATTGTGCCAGAGATATGAAGCGAATGCGCGTACGCACTTGTCCAAATTGTGGCAGGCGTATAGTTAAATGGCTCAGGACTCGAGTGAAGCTTAAGACTTGA

Transcript

ahya_s0024.g22.t1

GTTAAAAGCTGCCAAATCTCGATGCGAAGAGATATAGAAGCTCTCAAAGACCAAGCGAGGGAGAAGACAAGCCATGGCCAATTGAACGACTTGAGGGATTCGCCGGAACAACTGCACTTTGCCAATTCAAGGATTGACAGATTTCAAGAGGAATTGAAGCAGCCGAAAAAGGTTTCCATGTTGCATGACAGAAGTGTTGATTATGAGCAAAAGTCATCAAAACATGCTCCACCATCCTTGTTGGATATTTCCGATCTTGACAATGGAACCCATCAGGGTAGCTCTTCATTTCTCCCAGGGCAATCTGCATCATCTCTGAGCACATTCGCCATCATACAGCCAAAAAATGTGGAACCTGCAGACTCACAGAGTTGTCATTGCTTTGAACTGCAAGAAAGAGTGAATGAATTAGAGGAACAGGTTAGGAGGAAGGACGAAGAAATACAGCTTCTGAAAGCCAAACTTGATTCATTACCCAGAGCACCCATGAAGGATGAGAGCAGGCAGTATGCTGCCAATTCATCTCCCAATGAAACAAGTTTGCAAACAAGACTATTTTTTGAAGGAGCTGCTTTCAGTAGACAGCCAGAGATTGTTGCAATGCCACCAGCTTCTTCACTATTGAAAGATAAAAGTTTCAATTTACTCTCTGCAGACGACCAAAAAAAGAAAAATGGAACGCGTAGATCTGCCAGAGGTTGGACGCTCAGTGGTGAAGTAGATAGTAGAAGGATTTTGCGAAATCAAGAGGACAACTCGTATGCATCATTTTCATCTTTTAAGAGCTCAGCTGAGAATGACAGAGAGATTCCTGCCTCGAGGGGTACTGAGAATTATGAGGTTCTTCCACTAGAAAGAGTGAGAACCGACTCCAAAGGAGACACTCATGTTCCCTTCACCTCTGTTCAGGCTGGCCCATCGAGTATTTTGAGCAGCACGAGTAGTAATTCATCAAATTCGTTGGTTTCAAACGGCGCTGAAGGTGTGCAAATGCCTTGTTTAAGGGGCGGCTCGTCAGGTTCCTACGAAGTGAAACCAACTGAGAAGATCCAAGCAACCGGCTCTGAGTTTTCAGATGGGAACGCTGAACACGACAAAGGAACTGTACGAAGGGGTGAGGTTGATCCTGACAGTTCTTCCAAAACTGGAAATCAACTTTTGCTGCAGCGAAACTCAAACGAACATGATCAACGAAAAGAGGAAAGGCTTGAGCCTGGTTCTGATAGTTCTCCCTCAATTGGAAATCAATCTCAACTAACAGAGGGAAGCTGCAAGCCTGATACAACCAGTAACTTTTACAGAAAATGGGAAACCCAGGGCGCGCGACCAAAACTTACTCAACGTCCAGTGGATCCGCCACTGTGGCCAAGCGCTAGCCCTGTGTCCGAAGGTTTGGCACAAGATTCCTTACCTGGACAAACTGATGTCTCTTGGGTTAGGAATGGAATGTCGAGTGATGAAGTTAATACAAGTAATCGTCTTTTGCCCCCGAACGACTTTGGGACCAGCGATCACAGTCTCACAGGCGAGCAGGATTTTGGAAACGCTGTAAAGGCCAACGACAATCCACTCGCTGCACTCAGCGAAAAGGGAGAAGGGAAAAGAGGGGAGCAAGAGGCCAATAAATTGCAGGAGGCGGGGCCGTCGCAGCAGAAAGACGTTAGCACAGGCTCACAGCGGCTGTGTGAGCATTACGTGCGACGCTGTAGAGTGTGCTTCTCATGTTGCGAGGAATTCTATGCATGTCATATATGCCATAACAAGTCAACCAAATGTGAAAATGGCCAAGCCAAGCCAGGTGAGGCAACACACCTGAAGTGTTCTCTCTGCCAATTTGAACAGGCGATTGATCAAAGCAGTGGCGTATGCCTTGGATGCGGAGAAGAGATGGCGGAGTATTTCTGCTTCACTTGTAAGCTCTTCAAGAGCTCAGACAAGAACCCGTATCACTGTGATCAATGCGGAATCTGCCGGCTCTATAAGGACAAAAAATTCCACTGTGAAGTTTGCGGTGTGTGTATGGATAAGCGACTGGAGAATAAGCACAAATGCCGACCGGACTGTGGCCACGATGAATGCCCCATCTGCTTGGAGGATACTTTTCGTGGCTGTCTGAGTACGCCCTGTTCGCATAGGGTGCATCTGGATTGTGCCAGAGATATGAAGCGAATGCGCGTACGCACTTGTCCAAATTGTGGCAGGCGTATAGTTAAATGGCTCAGGACTCGAGTGAAGCTTAAGACTTGAGAGAAGCGTAAAGGCCACCATTAATTCAGTGCCTTGCAATTCTAATGGCTGTTTGATGTCACAGACTTGAAAGATGCTGGACTGTTTCAGGAGCTGTGATCTTTATGTACTGTTTAATAAACGAGCGTGAGTGTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05495	zf-CHY	CHY zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008913	Domain	Zinc finger, CHY-type	Interproscan
IPR037274	Homologous_superfamily	Zinc finger, CHY-type superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR049813	Domain	Echinoderm microtubule-associated protein-like elp-1, trimerization domain	Interproscan
IPR037275	Homologous_superfamily	Zinc finger, CTCHY-type superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017921	Domain	Zinc finger, CTCHY-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21319	RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan