Detailed information of ahya_s0024.g28.t1 in Acropora hyacinthus

Genomic Location: sc0000024_pilon:1279229...1315423
NR annotation: XP_015780574.1, PREDICTED: uncharacterized protein LOC107358488 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3ZBV2ATP-dependent RNA helicase DDX19A OS=Bos taurus OX=9913 GN=DDX19A PE=2 SV=1
Q61655ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2
Q9NUU7ATP-dependent RNA helicase DDX19A OS=Homo sapiens OX=9606 GN=DDX19A PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF05495zf-CHYCHY zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR017921DomainZinc finger, CTCHY-typeInterproscan
IPR008913DomainZinc finger, CHY-typeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR037275Homologous_superfamilyZinc finger, CTCHY-type superfamilyInterproscan
IPR037274Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan

TOP