Gene detail

Detailed information of ahya_s0029.g91.t1 in Acropora hyacinthus

Genomic Location: sc0000029_pilon:844303...847234
NR annotation: XP_029198957.2, LOW QUALITY PROTEIN: 50S ribosomal protein L1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B1L938	Large ribosomal subunit protein uL1 OS=Thermotoga sp. (strain RQ2) OX=126740 GN=rplA PE=3 SV=1
P29393	Large ribosomal subunit protein uL1 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=rplA PE=3 SV=1
A5IJW6	Large ribosomal subunit protein uL1 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=rplA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan
IPR002143	Family	Large ribosomal subunit protein uL1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan