Gene detail

Detailed information of ahya_s0032.g57.t1 in Acropora hyacinthus

Genomic Location: sc0000032_pilon:1926689...1936764
NR annotation: XP_044180610.1, tetratricopeptide repeat protein 28-like, partial [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0032.g57.t1

aactgatgatcttcccggacaagaagaagccttgagaagtcttggtcttccttacggctgaatgggtgactatcaaaaagccattgagtatcatgaaaaacgtttgaaaattgcacgagcaatcggtgatcgggctgaagaaggagaagcatatggaattctcggttatgcctgcctgtcacaaagtgattatcgaaaagccagtgagtatagtaaaaaacttttgaaaattgcactagaaatcggtgatcgggctagagaaggaggagcatatgaaattctcggttatgcctgctggtcacaaggtgattatcgaaaagccattgattgccatgaaaagcatttagaaattgcaatagacatcggagaccgggccggagaaggaagagcctatggaagtctcggtagtgtgaacttgtcattaggtgattatcaaaaagccattgagtatcatgaaaaacatttgaaaattgcactagaaatcggtgatcgggccgggcaaggagcagcctatggaagtcttggacttgtacacgactcactgggtgactataaaaaagccatcaactattttggaaaacgtttaaaaattgcaaaagaaatcagtgatcggtccggcaaaggaaaagcctatggaaatctcggcaacgcttactggtcactgggtgactatcaaaaagccattgagtatcatgaaaaacatttaaaaattgcaaacgagGCACTTTTCATTTCTAATGTTAGTTTCGGAATTCCTGGTGTCTGAAAAAATGTAGGATCAGCGACTTCCTCTTCATCATTAGAGGCATATAAGTCCGAGTAAAAGTTTTCAATTTCTACCATGATATTCTTTTGGTTCAAAATAAGAGTACCTTTGCTTGTAAACATCCTACGAATACAGCTCTTCTTTCCCCTGTTGGATTCAAGCCCTAAAAAATATTTATTACTTTTCTCGCCCTGTTCATACCAAGTTGCTCTTGATCTGACAATTGCGCCTTTAGCAATGTAATCGAAGTGAGAGTCATATTTGTTCTTTAATTTTTCTAGGGTTTCTAAGTTGGATGCTGATGGGTCAGATATCAAGGTTTCCTCTGCCTGTTTTATCGATGCCTCAATTTGCAGCAGTTCTTGTTTTCTCTTAAAGGCTATTTCTTTGCTATATTTCATAGTAAATTGTCTTATACGGTATTTGATTAAGTCCCATAAAACTCTTTTATCGGTCACGTCTATAAATTCCTCAAGCCATTCTAGTATTTTTTGTTCAATCACGGAGACATAGTTTTCATCCTCAATTAAGCTAGAGTTAAATTTCCAATATGAAGGGCCTCGCCTTGGTTCATCGAGGCTATTGAAGGATATAATTATAGCCGAATGGTCCGTCCTAATGGCAGTCTTAATGCTCGTTTCCTCTACCTCATCCTGACAGAAATCACTGATTAACCAGAAATCTAGGCGCCTTTGAATTAGAGGTTTCTTTTGCCTCCAAGTGAAAAGTGTGCTATCTGGGTTTCGAGTTCTCCATATATCAATTAAATCATAATTTAAACAAAGATATAATCAGAACCCTGTACTTTGGCATTCAACAAAATGTAACGACCTTTATCATCCGTTATTATTGATTTCATTTCAAATTCTAAGCTATCCCTTACCAAAACTAAGACACCACAGCTGTGATTCGAACCATGTGCAAAAAACATAGGGCCTTTCCACTGACACTTCCAATTGTTTTCAACTTCTTTTGTACTATAGGTTTCTTGTAGGAATATAATATCCACCTTTTGTTTTTGAAGCCAAATAAGCAGAGCCTGTCTCTTTTCAGGGGAGCGAATACCGCGAGCATTTAAAGAAAGCATTTTAAAATCTAAAGTAGCATTTTCCTGCACCACTGTACCTAATTAAATATTGAATAATTCCATCCGCCGAATTAGCAAGAATGATTAAAGGTGTTAGCATAGAAAATGTGAGAAACCAGTTATTAAGTATTGTACCTAACAAACATAATGACAAAAACGTTACACTACATCTAAACCCCGAAGGAGACACTACTACAATTCGCATACACATGTAAGCACGCATAAACATATATAAAAGATCGCAAGAAATGATCCTAAACGCGACCTTGCGACTTGGACTAGCAGGAAAAAACAAAAACAAAACAAAACAAACTAAAACGAAATGTGTAGACCTAACAAAACTAAAGATTAGCTTATCTGAAATTACAGCAATCTCGACTCTAGTGAACACTCCGAAAAAAGCCTTTTTTGATAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala