Gene detail

Detailed information of ahya_s0055.g5.t1 in Acropora hyacinthus

Genomic Location: sc0000055_pilon:187773...197845
NR annotation: XP_044171647.1, uncharacterized protein LOC122955980, partial [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ahya_s0055.g5.t1

atggaaaaaattttaaccccagtagtcgaaacgtatctggaatgtaataagttatcacaaggtaatcttaaggaagacttgaaatccttcactgaccacatagaaaacgtctatggggtaaacttggtcactgttggtaagggttctgtgatcatcattctggactgccctacattagacagtctagagcatctgtgGaatgattatctcgctggtcatcttgataaccttgctgagcgataccttgttacaaacgaaatgaagaagaagttcgacctggagacagtttccctcaagacaaccatactagaggaagactacttgaactgcaaggaggctctcatggaacttcgaagtacatattcagctgtcatcgacaactcttcagtactccaatggctgaaaggagaatataacagacgagccgaatttagtccgcttctgtggagcaaaggttcaaagttgcagctaaaagacctctatgcaaggttatcagttgtctcgagtctttactcagaaataggtgtcaatgaaatttttagttcatccaggaaaggtgaagattcaatggtgcttttgaaggcatatgagggaattggcaaatcattcttctgtcttaaacttgctcaggactgggcgaatggtgcaatgccttcgacatttcctattttcgaacttgtcttgttgctgaaatgcaaagacatcgaaggacatataatggatgccatcagcgagcaacttttacccagaaatttagagaacaagacgagggaaaattttctaaagtttatgggagatgctagtaaccaggaaagaattcttatcattttggatgggtggaacgagctcccagaagaatcgaagcatcacgttgacaatgttcttgccagacgtgtcttaaagtgttgttatgtgatggtcacaacccgacaaagacctgaactctggaaatcattcaaatttgaatcctgccttgagatgaaggtacttggtaaagatgattcatttgattacatcaggaaacatttcaagaatactgaaacagaggaatcatgtaagggagaaaggctcacagaagaaataaaacgaaaccgtttattacgaggctttttaagtgatcgtccaaatttgtttcttctttgcctcctttatgaagaccatgaaggacagctgccttcttcctgttctgatctttaccaagcccttgtgaggtgcgttttgagaagatattgtgataaacaaaagttgaaagctaatgaagaagacatgagcttggccaaacagttcgaaagagacatccttgcacttggggagctagcgtggaaatgcttgttgaagaatcgccacagttttcgcgaagacgaattaaagttggagagaagtgatgaaaagtcgatatctcttgggcttggctttgtttacaaggaggaaagttttaagcgatctgacccacatcatgtgtttacctttgttcacaaaacatttcaagagtatttagccgcttcatacatcgctcataacttaagaagaagcgagtttaatgtgcttgggcaagtacagtttgggtccatgacgtggcgatatcgaaaggtatttttatgtgtgtgtggaatactccgcgaggaggcaagtattctcttcgcgcagattggtgatacgcttcagaaagactgggactggtccaaatgcagtgatgacgaggcaagttttttctctgaaagttggaaagaaagtggaaatgctgaagaaatggcgaatactctttgttcatttttaccctttcctcgggttctacacgtaagggaacaccaccacgaggagatgataaatgttctagaggcgtgcgcggggttttccaaggtacagacacccgctgaagttcacgttgcagtttctcctcgtttacaagatgttaaaaatatccagcgtgttttggcgggggttccaaatgtgaaaacgctaatcttacctgctgtaaattacagtattgatcgtgcggaagttggagaagtcctgagagctagcaagaccttagaaaaagtgacgtttacgttgtcgacagggcgtggccagggctgggccagtgcccttgacgttggattaagtgctgactcatcattgtcgtctgttggtcttcggatttatggtgtattgaatcagtctgcattacaggctgtagagaatttgctattcaacaaatgtctgtcctctctttctattgctatgtatggagatgtacaggaatcgctcgctaaggcgcttgcaggagggctgtcaggaaatagtgctgtaaatttccttgatttgtgtgtcaacggaaagttgagttcctatggagcttgttcattagaagaaggtattttaagaagtggatcactgagaaatgtaaagatttctgttaatggagaacttcctgtcaattggcaggctgttggagagaatcttcatgcaaaattgaccgagaaaggggtcgtttctagaatctacccaaacaccttcagtaaagtgaaagacagtcaggtgacatgtttgaatcgcatgttgtcaaagtctcatttagttcaacaaaatcttactctaaatgtttggggtgagttgagtgatgacgcttctaaagcagtgtgtgaggtcttattgcattacccggtgtctcaagtgacgttaaatatccacggacaattaaccgatgaaattcttcgctgcacagcaagatgtgtgaaagaacaggaaaaaacctcttcaataaccatcaacgcttgggttcttcaaatgaccgaaaaggaaaacaatcttattaataaacttggattggacaaaaatccatcagtatcattaaatgtgtgtggagccagtgcaccctcaaaggaatcaagtgatagcgaaattatctcgagtaacaacccgggatctcttattgcgttctttaagaaggctgccaaagtctcatctaaatctctttccctcacagtcatcctaatgcccgacacaagtagcttccgctggctaaacgaacttggcgatggtttgaaaaagatcacttcgctgaattcactcactctggcaattaactatggtgacgaaagcagcttctgggcaaaagaacttggcgaggctttggcaaaaagtacctcgctagaatcactcacactggcaattaacaactatggttacggaagctacttctgggtagacgaacttggcgatggtttggcaaaaagtacctcgctgaattcactcacattgacatttaacatctatagtgacacaagctgcttctgggtagacgaacttggcgagggtttggccaaaagcacctcgctgaattcactcacactggcatttaacatctattgtgtcccaagccgcttctcggtaggcaaacttggcaaggctttggcaagaagcacctcgctgatttcactcacactggcatttgacatctacagtgacacaagcagcttctgggtaggcaaacttggcgagggtttggcagaggccaagtttttaactgaatgtaatttcatagtcaacatttgcggtgaatgcaaagttctaaccggatcttttataaaaactgttgagaagtga

Transcript

ahya_s0055.g5.t1

ttccaagtcatttagacttgttgtcggtggtcactgcatcatttctcaggttgtttatctgggaaaagaatctcgagggaaaaaaaaaagaagccatggaaaaaattttaaccccagtagtcgaaacgtatctggaatgtaataagttatcacaaggtaatcttaaggaagacttgaaatccttcactgaccacatagaaaacgtctatggggtaaacttggtcactgttggtaagggttctgtgatcatcattctggactgccctacattagacagtctagagcatctgtgGaatgattatctcgctggtcatcttgataaccttgctgagcgataccttgttacaaacgaaatgaagaagaagttcgacctggagacagtttccctcaagacaaccatactagaggaagactacttgaactgcaaggaggctctcatggaacttcgaagtacatattcagctgtcatcgacaactcttcagtactccaatggctgaaaggagaatataacagacgagccgaatttagtccgcttctgtggagcaaaggttcaaagttgcagctaaaagacctctatgcaaggttatcagttgtctcgagtctttactcagaaataggtgtcaatgaaatttttagttcatccaggaaaggtgaagattcaatggtgcttttgaaggcatatgagggaattggcaaatcattcttctgtcttaaacttgctcaggactgggcgaatggtgcaatgccttcgacatttcctattttcgaacttgtcttgttgctgaaatgcaaagacatcgaaggacatataatggatgccatcagcgagcaacttttacccagaaatttagagaacaagacgagggaaaattttctaaagtttatgggagatgctagtaaccaggaaagaattcttatcattttggatgggtggaacgagctcccagaagaatcgaagcatcacgttgacaatgttcttgccagacgtgtcttaaagtgttgttatgtgatggtcacaacccgacaaagacctgaactctggaaatcattcaaatttgaatcctgccttgagatgaaggtacttggtaaagatgattcatttgattacatcaggaaacatttcaagaatactgaaacagaggaatcatgtaagggagaaaggctcacagaagaaataaaacgaaaccgtttattacgaggctttttaagtgatcgtccaaatttgtttcttctttgcctcctttatgaagaccatgaaggacagctgccttcttcctgttctgatctttaccaagcccttgtgaggtgcgttttgagaagatattgtgataaacaaaagttgaaagctaatgaagaagacatgagcttggccaaacagttcgaaagagacatccttgcacttggggagctagcgtggaaatgcttgttgaagaatcgccacagttttcgcgaagacgaattaaagttggagagaagtgatgaaaagtcgatatctcttgggcttggctttgtttacaaggaggaaagttttaagcgatctgacccacatcatgtgtttacctttgttcacaaaacatttcaagagtatttagccgcttcatacatcgctcataacttaagaagaagcgagtttaatgtgcttgggcaagtacagtttgggtccatgacgtggcgatatcgaaaggtatttttatgtgtgtgtggaatactccgcgaggaggcaagtattctcttcgcgcagattggtgatacgcttcagaaagactgggactggtccaaatgcagtgatgacgaggcaagttttttctctgaaagttggaaagaaagtggaaatgctgaagaaatggcgaatactctttgttcatttttaccctttcctcgggttctacacgtaagggaacaccaccacgaggagatgataaatgttctagaggcgtgcgcggggttttccaaggtacagacacccgctgaagttcacgttgcagtttctcctcgtttacaagatgttaaaaatatccagcgtgttttggcgggggttccaaatgtgaaaacgctaatcttacctgctgtaaattacagtattgatcgtgcggaagttggagaagtcctgagagctagcaagaccttagaaaaagtgacgtttacgttgtcgacagggcgtggccagggctgggccagtgcccttgacgttggattaagtgctgactcatcattgtcgtctgttggtcttcggatttatggtgtattgaatcagtctgcattacaggctgtagagaatttgctattcaacaaatgtctgtcctctctttctattgctatgtatggagatgtacaggaatcgctcgctaaggcgcttgcaggagggctgtcaggaaatagtgctgtaaatttccttgatttgtgtgtcaacggaaagttgagttcctatggagcttgttcattagaagaaggtattttaagaagtggatcactgagaaatgtaaagatttctgttaatggagaacttcctgtcaattggcaggctgttggagagaatcttcatgcaaaattgaccgagaaaggggtcgtttctagaatctacccaaacaccttcagtaaagtgaaagacagtcaggtgacatgtttgaatcgcatgttgtcaaagtctcatttagttcaacaaaatcttactctaaatgtttggggtgagttgagtgatgacgcttctaaagcagtgtgtgaggtcttattgcattacccggtgtctcaagtgacgttaaatatccacggacaattaaccgatgaaattcttcgctgcacagcaagatgtgtgaaagaacaggaaaaaacctcttcaataaccatcaacgcttgggttcttcaaatgaccgaaaaggaaaacaatcttattaataaacttggattggacaaaaatccatcagtatcattaaatgtgtgtggagccagtgcaccctcaaaggaatcaagtgatagcgaaattatctcgagtaacaacccgggatctcttattgcgttctttaagaaggctgccaaagtctcatctaaatctctttccctcacagtcatcctaatgcccgacacaagtagcttccgctggctaaacgaacttggcgatggtttgaaaaagatcacttcgctgaattcactcactctggcaattaactatggtgacgaaagcagcttctgggcaaaagaacttggcgaggctttggcaaaaagtacctcgctagaatcactcacactggcaattaacaactatggttacggaagctacttctgggtagacgaacttggcgatggtttggcaaaaagtacctcgctgaattcactcacattgacatttaacatctatagtgacacaagctgcttctgggtagacgaacttggcgagggtttggccaaaagcacctcgctgaattcactcacactggcatttaacatctattgtgtcccaagccgcttctcggtaggcaaacttggcaaggctttggcaagaagcacctcgctgatttcactcacactggcatttgacatctacagtgacacaagcagcttctgggtaggcaaacttggcgagggtttggcagaggccaagtttttaactgaatgtaatttcatagtcaacatttgcggtgaatgcaaagttctaaccggatcttttataaaaactgttgagaagtgactggttgaagacattaagattgaaggttaacgatccttgagtcaagatttggttgccgtgtatacgacctccatcactctctcattaaacattcagttttttt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08727	NOD1, CARD4; nucleotide-binding oligomerization domain-containing protein 1	-	Pattern recognition receptors	ko04054	deepkoala