Gene detail

Detailed information of ahya_s0064.g102.t1 in Acropora hyacinthus

Genomic Location: sc0000064_pilon:2489718...2517860
NR annotation: CAH3014932.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0064.g102.t1

TTTATTGCATCTTCTGCACGGAAAAAAGTAACTTCTCGTGAAGAAGCACTATTATGTGATGGGTGCGACAGGTGGCAACGCCGGTGTTGTGAAACGGGGATCACGAGGGAGCAGTACAGAGCGGTAGTCCCATCAGGGAAAGAAGTAATTTGGCGATGCCTGAACTGCAGTGACAATTTCACAGACCATTCCCTCCCAGTCGCCGAGAGCACACGACTCGAAGAAACGGACAACTTTAACGTACCTGCATCATTTAATGACTCGAGTTCACTAAATCAGGAAACAGGTATGAGCATTTTGGTAATTGCGGTGATTAAAATACATTGAGGCTCGcacgcaactgattggttaatactcgtgtttctataactcgataaaaacacagaaaatgtttttatttcttaattggttgatcaggttatgaagtgtaaattgcatagtgtagagaatctacgttttgatgataatcagaactatcaagttttcttcgttttccgttattttctttgagctattttctaaaagaagtagaaaacattttctttgtgtttctatcgagttatagaaaccctcgtgaagTAGTGTTGTGAAAGTTTCTTAGCAAGAAATGGATCCGAATTTGTTACGCGAGTGCGCACAGCGTTTGTTAGAGACAGCGGACTTTATCCGCGGCACTATTCGGACCACTGCTGTAACGTCCACACCGCAGACGACAACAACAACCTCGAGCTCAGCACCTGTGATGCAACAGACTGAACAGACTATGCAAACTCGACCAAACAGCGCAACGAACCGTGACACTGTTAGGAGTGAGCACACCCGACTCTTTGGCTACCGACCGCCAGCTCCGTTACGAGCTCCTCGAAATCCTCGTGCAAATAGTAGGGGAATACGCCGCTCGCCCTATACAAACGCAGCCATAGGTCGTGCGAGCTCCACGTGGGGCAGATCATTTGTATGTATGGCAACAGCCGGACAGCAAACGCCACAGTCAACCTCAGAAAGGATTGACCTGTCACTGAACGGCCTAGGGGAGAAGAAATTATCGTTCCCCAAAGGAAACTCGGCAGAGGTTCACGAAACCATACTGGCGGCTTTTCCGGCATTGGGGGAAGGTTATAAAATTCTTCGTGCGGGGCAAGGGAGGTCCAAACAACTGCTTGTAATTCCGATGCCCCCCAATGGCTTCAGCGTGAGCTATCTGCAAAGTGTGCTGGGGCAAGCCAAGGGCTATCTGAGGCCGTTGCAAAGAGACATTGTGATGGAGACACGTCAAGGAAGTATTGCCAGCCCAGACAAGTCTACCACTAGTTCTTCCATGTCAACCACGGTTACTGCAGCTTCCACACGATCCTCATTGTGGGCATCCACTGTTTCCAAAGCTTCAACTGTTGGCATGCAAATTATCAGGAAATCCCTTGAGGGCGAAAACATTTCAGGACACTCTGCCGACATTATCCTCGCATCTTGGCGCTCAGGAACGCAGAAGCAGTATCAAACCTATATCAACAAGTGGCTTAACTACTGTTCTGAAAGGGAACTTGATTCACTTCATCCCTCTCTAGCAGATGTTATTCAGTTTTTGACATCATTGCTTGAAAGGAATCTCAGTTATAGCTCACTGAACTTTGCAAGGAGTgcactatctactattatcactgttgatgAGCAAGTGGAGAATCTCAGGCAGCTTTTCCCCCATGTGCCTGCAACTGAAGTGGAAATTGCTCTTCAGACTGTGAATGGAGATGTGGATGAGGCAGCAAGTGTCGTTATGCTCCAAAATTCATCTGGTCTGTTAACTGTAGACACAGGGGGCCCCAAGAGGGAATTTTACACTCAGTTGTTTCATGGTATAGTGACATCTGATGGCAGTGTTGTGCCTTTAATGTTTGAAAGAGCAGAGGGTAGGCTAATGCCCTCATACAATTCAAGCGTTGTCTACACTGGAATGATGAAGATAATGGGAAAAATTATAGCTCACTCTATAGTGCAATGTGGTGTGGGCTTCCCCTACTTGTCACCGGTGTGTTACTGGTATTTGATCACTGGTGATGTGTCAAAAGCCATTAGCTACGGCAATACAGAAGATGTACGAGACATTGAATATGCAGATCTCATCCACAAGTTGTTAGATGCCAAGACCGATGAGGACATGGCCCTACTGGTATTAAACCGGCAACTTTTGGTGGAAAGCCTGATGCTGCACACAATTCTCAGAAAACGGAAGGTGCTCCTTGACCAGCTGAGGAAGGGTCTTGAAACCCTAGGTGTGTTGGAAGAAGCTGCAAAGAGGCCATTAATCTTCGAAAGTTTTTTTGTGTCCTCTGATGAAAATTTGACCTCCGATAAGGTCAAAGGATCACTGACATTTCCAGGGGACATGGATGATGACCAAGTACAGACCATGGCTTATTTCCTGTAGTTTGTGGGTGAATGCACCAAGAAGGTACATTAACATTAATTTATTATTAAAGTAAAAAAAATTGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13495	Phage_int_SAM_4	Phage integrase, N-terminal SAM-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR004107	Domain	Integrase, SAM-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35617	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan