Genomic Location: sc0000098_pilon:2008460...2026527
NR annotation: XP_029201649.2, mediator of RNA polymerase II transcription subunit 16-like [Acropora millepora]
| CDS | |||||
| ahya_s0098.g122.t3 | |||||
| Transcript |
| ahya_s0098.g122.t3 |
| Protein |
| ahya_s0098.g122.t3 |
| Uniprot term | Description |
|---|---|
| Q08D69 | Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus tropicalis OX=8364 GN=med16 PE=2 SV=1 |
| Q6PGF3 | Mediator of RNA polymerase II transcription subunit 16 OS=Mus musculus OX=10090 GN=Med16 PE=1 SV=2 |
| Q9Y2X0 | Mediator of RNA polymerase II transcription subunit 16 OS=Homo sapiens OX=9606 GN=MED16 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20719 | Med16_C | Mediator complex subunit 16, C-terminal | Domain | Interproscan |
| PF11635 | Med16_N | Mediator complex subunit 16, N-terminal | Repeat | Interproscan |
| PF20718 | Med16_bridge | Mediator complex subunit 16, central helical bridge | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR048338 | Family | Mediator complex, subunit Med16 | Interproscan |
| IPR048339 | Domain | Mediator complex subunit 16, C-terminal | Interproscan |
| IPR021665 | Domain | Mediator complex, subunit Med16, N-terminal | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR048616 | Domain | Mediator of RNA polymerase II transcription subunit 16 , central helical bridge | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13224 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016592 | Cellular Component | mediator complex | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15159 | MED16; mediator of RNA polymerase II transcription subunit 16 | - | Transcription machinery | ko03021 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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