Gene detail

Detailed information of ahya_s0098.g98.t1 in Acropora hyacinthus

Genomic Location: sc0000098_pilon:1468063...1475001
NR annotation: XP_029202063.2, meiotic recombination protein SPO11-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9WTK8	Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2
Q9Y5K1	Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1
A2XFC1	DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04406	TP6A_N	Type IIB DNA topoisomerase	Domain	Interproscan
PF21180	TOP6A-Spo11_Toprim	Topoisomerase 6 subunit A/Spo11, Toprim domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR002815	Family	Spo11/DNA topoisomerase VI subunit A	Interproscan
IPR034136	Domain	Topoisomerase 6 subunit A/Spo11, TOPRIM domain	Interproscan
IPR013049	Domain	Spo11/DNA topoisomerase VI, subunit A, N-terminal	Interproscan
IPR036078	Homologous_superfamily	Spo11/DNA topoisomerase VI subunit A superfamily	Interproscan
IPR013048	Family	Meiotic recombination, Spo11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10848	MEIOTIC RECOMBINATION PROTEIN SPO11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003918	Molecular Function	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006259	Biological Process	DNA metabolic process	Interproscan
GO:0000228	Cellular Component	nuclear chromosome	Interproscan
GO:0000706	Biological Process	meiotic DNA double-strand break processing	Interproscan
GO:0007131	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0042138	Biological Process	meiotic DNA double-strand break formation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10878	SPO11; meiotic recombination protein SPO11	-	Chromosome and associated proteins	ko03036	deepkoala