Gene detail

Detailed information of ahya_s0110.g45.t3 in Acropora hyacinthus

Genomic Location: sc0000110_pilon:1109184...1113784
NR annotation: XP_015778544.1, PREDICTED: uncharacterized protein LOC107356442 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5BJL5	Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2
A3KN83	Protein strawberry notch homolog 1 OS=Homo sapiens OX=9606 GN=SBNO1 PE=1 SV=1
Q5F371	Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13871	Helicase_C_4	C-terminal domain on Strawberry notch homologue	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR026741	Family	Protein strawberry notch	Interproscan
IPR026937	Domain	Strawberry notch, helicase C domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12706	STRAWBERRY NOTCH-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0031490	Molecular Function	chromatin DNA binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan