Gene detail

Detailed information of ahya_s0131.g29.t2 in Acropora hyacinthus

Genomic Location: sc0000131_pilon:533400...540914
NR annotation: XP_029190449.2, beta-secretase 2-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0131.g29.t2

cacacaaagattcattTGCTTATAGGCAGGCCCATTTCGATCATTAAGGACTGTTGATCTTCCTCATGTCTAATACCGAGAAAAGTGGTTATGCTGGCTCGATGGCTTCTTTCAGATATATTTCTTTTGTTGACCCTTCTTCGAGTGACACGCCCTTTTGCATTTGAACGGAAAATGTCCACCGCGTCGTTTGATTTACGTCGAAAAACGAAACATCATCGCCACCGAAACGGAACAACTTTGCTTCCAACTACAAAACCGGTGACAATGAATGACGAAGAGATGGAGTTTTCACTCAGAAGTACATCTTACGCTTATGTTATTGAACTGGATCTTGGCACGCCTCCACAACGGatggagtttcttgtggacaccggttcttctaatatggcagtggcgggccccaattgccgcgatgaaatggagcgcaagtgtgcaatagacaccttttattacccagaaaaatcaaacacatctgaggatcaacacataccgAATGGATCACAGTTCATTGAAAATACTTTGGAAAGATGTAGTCGAATCTTTTCCTCGCCGATTCCGAAACCCCTGAAGattgaaacagagtatggcaaaggagcatggtcaggcaatatttaccgcgatgtagttgcttttccaggagatgGTCCAACAACTACAGCAGAATTTGCAGTCATCAGCCACGAAAAAGATTTCTTCTTAAGAAATTCTATAAATGAAGGCATTCTTGGTCTTGCTTACAAAAGTTTGGCGACAGATGACGTACAGCCATTATACGACCAACTTGTTCAAGATAATAAAGTTCCTAATGTGTTTTCTCTTGGCTTATGCAATGGCATGGGTAAAATCTGGCTGGACCTTCCAGAGCCATTTGAGTACCATAGACCCATTCGTTACACCAACATCAACCAGGAAACCTGGTACAGTGTTTCAATGACAGGCATTGATATTGCAGGACACAACCTTGGTTTGTTGTTGCCCCATTATTCGTCCGCCATTGTAGACAGTGgtacaacggatattttgctgcagcccgaggtttattctgctgtcataactgaactgaagttggttccgcggtccaccggtggatgaacgcttttggaaaagttactgtgttgatacggacccttatcagtggccttacatcaccatctacctcaaggacacaatCGGAGGTTCCTTTGGTTTAACTGTTCTTGGAAAGCATTACGTCAGAAAACAAGACGAATTTTACTGTCTAAGCATTGGCGCCAAACGGTCCGGAGCTGTGCTGGGCGAAGTTGTTATGGAAGGAAATGTCGTAGTATTTGATCGAGCCAATCAGAGAATCGGATTTGCCCCCAGTAACATTTCACAGGCTGAGGCTGGGCCATGTGGTAATCCAATTCGTGTCAATAATACGGTGAAAGGTCGTCTTCACAAATACTGCCGAGCTTCCGACATGCCCCAAGAGACGTGCTTCATGGGTTGCAAGTCCTGCATCAAGTATGGCGGTGTGTGGTGTCCAAAGGGCCACGTCGTAGTGTGGATCAATGGCGTCAGATCTGTTCTCAGTACAACCAAAGGCTTCTGCTGGCCAGGAGGCCTCTTTACACTCGATGATGCAAAGGTTCAGACCTTTCTAAACGGACATGGTAGTGCTGAATTTCAAGCCTATTGCGACACCTTAGTTCCAATGTATAGACAGTGCTCAGTGGCAGGTATTTGGATCTTGTTTTTGGGCGGTTTGGCATTCTTCTGCCTGTGTACACTGTTTTTGTATGTAAGCTGTCGAGGCGTTACGAAGACTAAATCGGAAAGTGACGGACTGACTCCGAATAGCACCGAACAAATCAAGGATGAGACGGATGAACATGTTTCCAGAAAATAAAACTGTAACTTCACGCAGGCGTAACGTATCTCCTGGCAATTAAACGTCGGAACCAGCATTCTCATTCCCAGGATTGTCGCTCTCCTTAGCACGTGTGGAGGAGGGACAAGGACTCTGGCGAGACTGAGAATCCATTGAATGAGAATTTGATAAAAATTTTGCAATAATTTTGATATTTTTACGTATTCGAACAATTTGAGAAAAGTACGAAGTCAACATTTATCTTAGTCAATATTTTCCTAACTTCTTTAACATTTTCGTTCTAAGCATTTTAAGACTGTAAGTTGACTATCTGGTAACTGAATGT

Protein

Uniprot

Uniprot term	Description
W8W138	Beta-secretase OS=Strongylocentrotus purpuratus OX=7668 GN=BACE PE=2 SV=1
Q9JL18	Beta-secretase 2 OS=Mus musculus OX=10090 GN=Bace2 PE=1 SV=1
Q9Y5Z0	Beta-secretase 2 OS=Homo sapiens OX=9606 GN=BACE2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00026	Asp	Eukaryotic aspartyl protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033121	Domain	Peptidase family A1 domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR001461	Family	Aspartic peptidase A1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47966	BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan