Detailed information of ahya_s0137.g24.t1 in Acropora hyacinthus

Genomic Location: sc0000137_pilon:648583...651529
NR annotation: XP_029201456.2, uncharacterized protein LOC114965906 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32PE9U6 snRNA-associated Sm-like protein LSm3 OS=Bos taurus OX=9913 GN=LSM3 PE=3 SV=3
P62310U6 snRNA-associated Sm-like protein LSm3 OS=Homo sapiens OX=9606 GN=LSM3 PE=1 SV=2
P62311U6 snRNA-associated Sm-like protein LSm3 OS=Mus musculus OX=10090 GN=Lsm3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08241Methyltransf_11Methyltransferase domainDomainInterproscan
PF01423LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR013216DomainMethyltransferase type 11Interproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR040002FamilyU6 snRNA-associated Sm-like protein Lsm3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13110U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0033962Biological ProcessP-body assemblyInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:1990726Cellular ComponentLsm1-7-Pat1 complexInterproscan

TOP