Detailed information of ahya_s0138.g10.t1 in Acropora hyacinthus

Genomic Location: sc0000138_pilon:220976...267105
NR annotation: XP_015757880.1, PREDICTED: ankyrin repeat domain-containing protein 50-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8N1B4Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens OX=9606 GN=VPS52 PE=1 SV=1
Q5TJF0Vacuolar protein sorting-associated protein 52 homolog OS=Canis lupus familiaris OX=9615 GN=VPS52 PE=3 SV=1
Q8C754Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF15112DUF4559Domain of unknown function (DUF4559)FamilyInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF20655Vps52_CVps52, C-terminalRepeatInterproscan
PF04129Vps52_CCVps52/Sac2 family, coiled-coilRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR027897FamilyProtein of unknown function DUF4559Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048361DomainVps52, C-terminalInterproscan
IPR007258FamilyVps52Interproscan
IPR048319DomainVps52, coiled-coil domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

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