Detailed information of ahya_s0239.g19.t2 in Acropora hyacinthus

Genomic Location: sc0000239_pilon:458637...505189
NR annotation: CAH3046881.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q9NYQ6Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens OX=9606 GN=CELSR1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR001190DomainSRCR domainInterproscan
IPR039448DomainRight handed beta helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06825FBN1; fibrillin 1-Glycosaminoglycan binding proteinsko00536deepkoala

TOP