Gene detail

Detailed information of ahya_s0241.g14.t1 in Acropora hyacinthus

Genomic Location: sc0000241_pilon:149522...161735
NR annotation: XP_029213690.2, L-fucose kinase-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ahya_s0241.g14.t1

GCTCTTTGTTTTTGAAAGCCAGACTCAACTTCCTGTGTCTGGGACTCACAGATTTTAAGCTCCCAGTCCCAGGACTCACTAGTTCCTGGTTCCAGATGGATCACTGCAGCAAGCCGTCATTTTCTTTGTTTTTTTGTTTTGTTTTAGACCTGTCCAGACCAGCGGAAAGTGAAAGCTAATCACTTTAAGTAATGGAGGGTCTGGAACGAGGGAAACTAATCTTATTAAGACTCACACCAATCACCCAAAATGACTTCTTTGTTTCTGTTTTGAGACAAACTGTGGAAAACCCATCCATTGCACATACACCACACAATGCATTGAATAATATGTTATCCTGGAAATGTTTCTTCCTCAGCCTGAAAATTACCGAAACCTCTGGAATGCAAAGTTGTTTTCAGTAGCTCATCCATTTGATGAAGATACTGGTAAGGGTGACATCTTTTGGTTGGCGAGCACTGGAGTGTCAGAGATTACAAGTCAGCAAAAGCTCACCAGGTGGCGCTCATCACTGAGGTTATCTTTGAAGGACATCATGTCATCCATTGACATGTCAGCAGAGTTTAGCTGGAAGAAGAAGCTTTGGTTTGACATTGGCAAAGCTGAAGTGGAAAATACACTAAGAAGTTGCCGAAGCAATTGTATTTTGCCCTTTTTTAAAAGTTGTGTCAGAGAGGGATTTCAAACAGAGATACTGGAAGTCTTAGATCAAGTTGCTTCCAGCACCAGCTCTCCAGGTGTGGCAGCACGGTCTTTAGCATGTGTTGCTGATGTGTTGGGTGCAATGGCAGGAGAGAGGGCTGGATTGAGAAGTGGTCCTGCACGCAACGAATCCTGGATGGATGCCTTTGAACTTCTTGATAAAGGGGAGATTGCGACGGGAATACAAGCTCTTTCCTCTGAACGTTCAAAATGGCTGGGCAGACCAGATTTGTTAATCCGAGCAGCGCGGCATTATGAAGGTGCGGAACAGGTGTTAAGAAGACAAGCTGTCCTCACAGCTACAAAGTTTTTCAAGACTGAATTATGTGACCCAGTACCCAGAGGACATTGGGTGATTGCAGAGGCACCAGCACGAATAGATCTTTCTGGGGGCTGGAGTGATACCCCTCCAATCACATATGAGCAAGGTGGAACGGTTTTAAATGTTGCTGTTAAACTAAATGGACAGAAAGTAACAAAAGCCCAAGTTCGCAAAATAAACAAGCTTGAGATCGTCCTTGTGATCCATGCTGCAGATAATGTTGTCAGAGTAATTTGCAGTAAACTAGATGACTTGAAAAACTATACCCAGCCTAATGCCTCAGGTGCACTGCTAAAGGCCTGTCTGTGTTTGCTCGACATTGTGTCCCTCTCATCAAAGGATGCTCTCAGTGATCAACTCTCCAAGAAGTACCAGTCTGGCTTTGAGCTCCACACATGGTCCACTGCCCCACAAGGAAGTGGGCTGGGCACCAGTAGTATTTTAGCAGGAGTTATCCTGGCAGCGTTGCTAAGGGTAACAGGACGCACAGCAAGTCTTGACTCACTGATCCACGCTGTAATGGTTGTTGAACAAATGTTAACTACTGGTGGTGGTTGGCAGGATAATGTTGGGGGCCTTGTGCCAGGTTTCAAGATTTCTCGATCGAAGGCATCTCTACCGTTAAAAGTGGAAGTTGAAAAGTTGGAACTGAGCCAAGAAACTGTTGACAAGTTAAGCAAGCGACTGGTTTGCTTTTACTCTGGCAAAACAAGACTTGCTAAGAATTTATTACAGAATGTGGTAAGAAACTGGTATGCAAGGTTTCCACAGATCACAAGCAATGCAAGAAACTTAATAGATAATGCCGAGGAAGCAGCTAAAGCTCTTCAGGAAGGAAACATTGAGAAATTTGGTGCATGCTGGACATGTTATCGACATCAGAAAAGTCTTATGGCTCCAGGCTCTGAACCAAAAGTCATTAAGGACTTAATGGAAGCATTGGAGCCTTTAAGCTATGGTCAAGCATTGGCTGGAGCTGGTGGAGGTGGTTTTATTTTTGTGTTGACCAAAGAACCCAATATGGTGGATGAAGTAAAAAATGTGATAAAGAAAATGGCAGTAGGTTTTTTTAATTTTGTTCTGTTTTCTGTAATTTTTATTGTAGAATTTTGGACTCATTCATGAACGTTGATGTCATAGATACTAAGGGACCTTATGCAATGACGACAGAGACAGAAACAAGAACATTGCTCCACTTAGAAGTTTGCATTATTTACTTGCAACATGAAAGAATGAATCTAAAATGAGTGTTGACTATCTTAAATTAAACTGGGCTGAATGGA

Protein

Uniprot

Uniprot term	Description
Q7TMC8	L-fucose kinase OS=Mus musculus OX=10090 GN=Fcsk PE=1 SV=1
Q8N0W3	L-fucose kinase OS=Homo sapiens OX=9606 GN=FCSK PE=1 SV=2
Q9LNJ9	Bifunctional fucokinase/GDP-fucose pyrophosphorylase OS=Arabidopsis thaliana OX=3702 GN=FKGP PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08544	GHMP_kinases_C	GHMP kinases C terminal	Family	Interproscan
PF00288	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001174	Family	Galactokinase/homoserine kinase	Interproscan
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR013750	Domain	GHMP kinase, C-terminal domain	Interproscan
IPR006204	Domain	GHMP kinase N-terminal domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR052203	Family	GHMP Kinase-Related Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32463	L-FUCOSE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0042352	Biological Process	GDP-L-fucose salvage	Interproscan
GO:0050201	Molecular Function	fucokinase activity	Interproscan