Genomic Location: sc0000395_pilon:4187...81615
NR annotation: XP_015779566.1, PREDICTED: uncharacterized protein LOC107357440 [Acropora digitifera]
| CDS | ||||
| ahya_s0395.g1.t2 | ||||
| Transcript |
| ahya_s0395.g1.t2 |
| Protein |
| ahya_s0395.g1.t2 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | CSD |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_PIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF02198 | SAM_PNT | Sterile alpha motif (SAM)/Pointed domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002059 | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR003118 | Domain | Pointed domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16155 | DED DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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