Detailed information of aint_s0001.g95.t1 in Acropora intermedia

Genomic Location: sc0000001_pilon:1195415...1210279
NR annotation: XP_044178296.1, polycystin-1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9U1S7Polycystin-2 OS=Caenorhabditis elegans OX=6239 GN=pkd-2 PE=1 SV=3
H2LRU7Polycystin-2 OS=Oryzias latipes OX=8090 GN=pkd2 PE=1 SV=2
Q9JLG4Polycystin-2-like protein 2 OS=Mus musculus OX=10090 GN=Pkd2l2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02010REJREJ domainFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR024731DomainEGF domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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