Gene detail

Detailed information of aint_s0012.g41.t1 in Acropora intermedia

Genomic Location: sc0000012_pilon:569810...574353
NR annotation: XP_029213854.2, acidic endochitinase SE2-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D4B4X4	Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03514 PE=1 SV=2
A2QUQ2	Endochitinase A OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=ctcA PE=2 SV=1
P46876	Chitinase 1 OS=Candida albicans OX=5476 GN=CHT1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001579	Active_site	Glycosyl hydrolases family 18 (GH18) active site	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR001223	Domain	Glycoside hydrolase family 18, catalytic domain	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR050542	Family	Glycosyl Hydrolase 18 Family Chitinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45708	ENDOCHITINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0004568	Molecular Function	chitinase activity	Interproscan