Detailed information of aint_s0015.g69.t1 in Acropora intermedia

Genomic Location: sc0000015_pilon:1094101...1116805
NR annotation: XP_015766352.1, PREDICTED: mutS protein homolog 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DE27RuvB-like 2 OS=Xenopus laevis OX=8355 GN=ruvbl2 PE=2 SV=1
Q9WTM5RuvB-like 2 OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=3
Q2TBU9RuvB-like 2 OS=Bos taurus OX=9913 GN=RUVBL2 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17856TIP49_CTIP49 AAA-lid domainDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan
PF06068TIP49TIP49 P-loop domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593DomainAAA+ ATPase domainInterproscan
IPR027238FamilyRuvB-likeInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR042487Homologous_superfamilyRuvBL1/2, DNA/RNA binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041048DomainRuvB-like, AAA-lid domainInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR010339DomainTIP49, P-loop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11093RUVB-RELATED REPTIN AND PONTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000492Biological Processbox C/D snoRNP assemblyInterproscan
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0097255Cellular ComponentR2TP complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08740MSH4; DNA mismatch repair protein MSH4-Chromosome and associated proteinsko03036deepkoala

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