Gene detail

Detailed information of aint_s0026.g85.t1 in Acropora intermedia

Genomic Location: sc0000026_pilon:1173293...1191670
NR annotation: XP_029182732.2, peptidyl-prolyl cis-trans isomerase D-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0026.g85.t1

TGTAATCTTACCTTTTACCCCCACATTTTCTCAAATAATGAGTGCAAATAGCAATTCACGATGCTTTTTCGATATTTCAATCGGAGAAGAAAAAGTAGGCAGGATTTTGTTTGAGTTATTTTTTGACAAATGTCCCAAGACTGCAGAGAATTTCAGGTCACTGTGTGTGGGAGATAAAGGAAATGGTCCAGAAACTGGGAAACCACTTCACTTTAAAGGCTCAACATTTCACAGAATAATCAAAGATTTCATGATTCAGGGTGGTGACTTTGGGAATCATGATGGAACAGGAGGAGAGTCAATTTATGGGGAAAAATTTGAAGATGAAAACTTTGAACTTAAGAGTGTAATCTTACCTTTTACCCCCACATTTTCTCAAATAATGAGTGCAAATAGCAATTCACGATGCTTTTTCGATATTTCAATCGGAGAAGAAAAAGTAGGCAGGATTTTGTTTGAGTTATTTTTTGACAAATGTCCCAAGACTGCAGAGAATTTCAGGTCACTGTGTGTGGGAGATAAAGGAAATGGTCCAGTAACTGGGAAACCACTTCACTTTAAAGGCTCAACATTTCACAGAATAATCAAAGATTTCATGATTCAGGGTGGTGACTTTGGGAATCATGATGGAACAGGAGGAGAGTCAATTTATGGGGAAAAATTTGAAGATGAAAACTTTGAACTTAAGCATGACAAACCAGGATTACTGTCCATGGCAAACTCAGGTCCAAACACAAATGGATCTCAGTTCTTCATTACTTGTGTTCCAACTCCTCATTTGGATGGAAAGCATGTGGTCTTTGGCAAAGTACTCAAGGGAATGAATGTTGTAAGAGAGCTCGAAAAGACACCTGTATACGCAGACGATTCAAAGCCAGTGAAGCCTTGTGTCATTTATGAATGTGGGGAGTTACAACCAGGGGAGGATGATGGTTTCTCGGGGATTGATGACGGAACAGGAGACAAGCTTCCTGAATGGCCTAGTGATTCGGAGCTTGATTTTAACAATGTTGAAAAAGTACTGATAGAGGTAGAGTTGCTGAAGAGTATTGGAAATGAACAGTTCAAGGCACAAAATTATGAAGTAGCTGAGAAGAAATATGCCAAAACTTTGCGATACCTTAAACACATTGATTCAGATGACGAAACTGACTCCAGTGAAGGTGAAAATGATGCACCAAAAGATGAGAAAGCTTCTGGAAGTGAAGAGAAAATAAAGACATTGTCAATCAGTTGTCACTTAAACCGTGCTGCTTGTAAGGGAAAATTAGGAGACCTTTCAGGAGTAGTAGAAGATTGCAATGAGGTTCTGAACATGGATACAAGCAATGTGAAAGCTCTTTACAGAAGAGGGCAGGCTAATACCAACATGAAGGACTTTGAACAGGCATTGACTGATCTCCAAGCAGCTGCTAAGCTGGCACCAAGTGACAAAAGTATAAGAAGTGAAATTGCAAGACTAAAGAAGCTAATGGAAGAGAAACGCAACAAGGACAGACAGATCTACTCAAAGCTGTTCTCATGACAAAGATATTTCTAAAATAACACCATTCTTGCATGTACTAAATTAAGTAACGTAGGAGCAGCAATTAAAAGTTGTCAATTTTTATACATCACTAATAAACTTGGCATAATTATTTTGGTGAAAGTAATGTTGGGCTCTGTGTCATGATTGCCTGCTGCAGTAATATTTCACTCAAATAGCTTTCTCTGATGACTGTAGTTTTATTGAGTTGAAATATTAATGAAAGTTGCATCACTCATTGTTTATAAAATGCTATACATTTTGCACAGTCTTTTGCTGACCTACTAAAATGATCATTGCAAGATAAAGATACAATAAAGTCACAAATGTGGAAGACGTTGTTGACAACACATCAATGTTCTGACCCTAACATGTTATTTTCAAACTCTCAATGCAAGATAATTGTGAGAATAAATGCCAGATAAGACAGTACATTGGTTCAAAAAAAGTGATTCATGCCA

Protein

Uniprot

Uniprot term	Description
Q6DGG0	Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3
Q9CR16	Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3
P26882	Peptidyl-prolyl cis-trans isomerase D OS=Bos taurus OX=9913 GN=PPID PE=1 SV=6

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00160	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	Domain	Interproscan
PF07719	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR029000	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR020892	Conserved_site	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	Interproscan
IPR002130	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR013105	Repeat	Tetratricopeptide repeat 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0000413	Biological Process	protein peptidyl-prolyl isomerization	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05864	PPID, CYPD; peptidyl-prolyl isomerase D	EC:5.2.1.8	Chaperones and folding catalysts	ko03110	deepkoala