Detailed information of aint_s0036.g42.t1 in Acropora intermedia

Genomic Location: sc0000036_pilon:719616...733281
NR annotation: XP_044179794.1, nucleotide-binding oligomerization domain-containing protein 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K2X2RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2
Q561R3RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1
A6QPE1RNA-binding protein 48 OS=Bos taurus OX=9913 GN=RBM48 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF00029ConnexinConnexinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR039599FamilyRNA-binding protein 48Interproscan
IPR013092DomainConnexin, N-terminalInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR034264DomainRBM48, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20957UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10356MYO1; myosin I-Exosomeko04147deepkoala

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