Gene detail

Detailed information of aint_s0037.g48.t1 in Acropora intermedia

Genomic Location: sc0000037_pilon:853610...858432
NR annotation: XP_020606199.1, serine/threonine-protein phosphatase 2A catalytic subunit beta isoform [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aint_s0037.g48.t1

GTGTAACAATGTTTTGCCATTTATTTATTTAGGCCAAAGAAATCCTAAGCAAGGAGTCAAATGTTCAGGATGTGAAATGCCCTGTGACAGTCTGTGGAGATGTGCATGGCCAGTTTCATGATCTTATGGAACTATTTAAAATAGGAGGAAGGTCACCAGATACTAATTATCTGTTCATGGGTGACTATGTTGATAGAGGATATTACTCTGTTGAGACTGTTACTCTCCTGGTCACTTTGAAGGTCCGTTTTCCTCATAGAATTACAATTTTGCGCGGTAACCATGAGAGCCGACAGATTACTCAGGTGTATGGATTTTATGATGAATGCCTCAGGAAGTATGGCAATGCCAATGTCTGGAAGTACTTCACAGATTTATTTGATTATCTCCCCTTAACTGCCTTAGTTGATTCACAGATATTTTGCCTTCATGGAGGCCTCTCACCATCCATTGATACTTTGGATCATATAAGAGCTCTTGATAGAATACAGGAGGTTCCTCACGAGGGTCCCATGTGCGATCTGTTGTGGAGTGACCCAGATGACAGAGGTGGCTGGGGGATCTCTCCACGTGGTGCTGGATACACTTTTGGTCAAGATATATCAGAGACCTTTAATCACACCAATGGCCTCACCCTTATTGCCAGAGCTCATCAACTAGTAATGGAGGGATACAACTGGTGCCATGATAGGAATGTAGTAACAATATTTAGTGCACCAAACTATTGCTACAGGTGTGGAAATCAAGCAGCTATTATGGAGTTAGATGATGCACTCAAATACTCCTTCCTCCAGTTTGACCCTGCACCAAGAAGAGGAGAGCCCCATGTCACACGGCGAACCCCTGACTACTTTTTGTGATGAGATGTTGCACTTCTGCCATGCAAACGTCGCAAGTTCTAGATATTTGTTTCAATTTTAAACCGCCCCTCTCTCTCTCTCTTATTTTGGCTTAAATGTGAGAAAATGTGGCCACCTTGAAGTATACAACAGACTTCTTGCATTTTATTGTTTCGTGTGTAGCTGGAGTTGTAGGCAAAGTAAGGGAAAAAGGAAGATGCTGGAGTGAGCGTAGTGTTGTAAAATGTGTGATAAAACTCCCCCGTTGATCTTTGCTTAAGACTTTAATTCATTTTTTAACCGTTAGGATATTCATTTTGTCTTTTTGAACTAAGTAATGTCTTTGTAAATGATGCCCTCACTGCATATCATCAGCTAACTGAAGCAAGGGTGGTGGGTTCTACTAAACATCTTCTGATGGAGAGTTAAAACAGAACACTGAACCTCCTTACAATGTAGAAAGTTTCTTTTAAGTGAGCGATAGTAATCATAAATTATGGAACATTATTTTACTTTTGTGCTGTTAATGTGACAGGTCACATTGAGAAAAAGTTGTTTGTTGCGTTAGCAGTGGTTTTCCTCAATCTGCCTTCGTTACTCTTACTATTATAATGAAGGAGTCCTGTGAGGTTGAAAGACCAGCAACCTGTGACGTAGCTAGAATAAGGGATGGAAAGCAAAAGCAGTTTAAAGGGAAAGCAAATGCCCTAGTTCTTGCTTTGGCTCATGCCAACCTGTTGTGAATTGTATGATAACTGATTATTCGCAGCAAGAAATAGGGTTCTGAATATGGTGTACAATAACTTCAAACAGTGATAGAAGTAATAATGATTGTATATTAACAGTGTAGAAACTTATCTGTGATTTTCTGTGAGAGAAAAAAGGTCAGCCCTTGGAGCAGTGTCTGCTTTATTTCGTGAAATCATTTTATTTAGCTTAAATATTTGAAGGATTTATTCAGAAAATGTTTAGTGGCCAATATATTATTTTGCCATAAGAATACAACATTGTTAGTTTACCCGGATTCAGGGGATGGCTTGGTTTCTCTTTTATAGAATCGATGTTTCAGAGGAGATTGATCTGAATTTAATGGCCTTGGAAACATTTAGGAAAAAATGAACCCGTCAGATTCATTTTAGTCGACTATTATCCGCGGCCCTTAGTCGGTTTCTTTAAACCGTGATCATTAAAGTGGTTGTAGCTTC

Protein

Uniprot

Uniprot term	Description
P11493	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa OX=9823 GN=PPP2CB PE=2 SV=2
P48463	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus OX=9031 GN=PPP2CA PE=2 SV=1
Q0P594	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus OX=9913 GN=PPP2CB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006186	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR047129	Family	Serine/Threonine protein phosphatase PP2A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45619	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04382	PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit	EC:3.1.3.16	Exosome	ko04147	deepkoala