Gene detail

Detailed information of aint_s0047.g40.t2 in Acropora intermedia

Genomic Location: sc0000047_pilon:506999...538663
NR annotation: XP_044173110.1, uncharacterized protein LOC114954144 isoform X3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aint_s0047.g40.t2

ATGACGTCTTCAAACCAACTTGGTTGGGATCGAAAATACACCTTGAAAGAAGCTGATTTTCACGAAAAGAAGTTACCTGATGACATCGGAGTGAAGTGGAAAGAATTAGCGCGAGAACTGGGGTTCAACCATGCCTTTATTGATATCACTAAAGATAAAATCCATTGTGCCAGGGAATGCTGTATAGAAGTCCTTGTTTGTTGGCACCGCCAGGAAGGAGAGGACGCTACTGCTGAAAAGCTGTTTGAAGCCTTGGTCAACATAGGACTAAAAAGCGTAGCTGAAAGGTTCCCGTGCAAACCAAGTGATCCAAGCCAAGTTGACAAATTGAGCGCCAGGAATAAGAAATTAGAAGATGAGGTTGACAAAATGAGTGCCAGGAATAAGAAATTAGAGTATGAGAACTCCAGACAGAGTGCCAGGATTAAGGAATTAGAAGACATGATTCAGAAAAACAAGGCAGTGTTGGAGACTGTTGCTGTAGCTGTTCAGGAGATGGAAAAAAACCCAGAACAAAGAAGAGAAGAGATCTTAAAGCGCATCAATTCAGAAGTACAAGAACTGCTGCAACAACTGAAAAGAGTTGATGAGGACAACACTGACAAATATTTGGTGTCCTCTATTGATGGGAAAAATATAGCAAAGGATAACGAGCCTAAGAATGATTTATTATGTCATGATGCAACGGTTCCACAACAGGATGAGGTTCATTTGCTGCAGTCATGTGAAGAACAACTGTCATTATACCAAGGAATATTTGATGCTTTCATCAAGCTCATTCCTGAAGTTGGCGAACTGAAAGACAACTTCGAGAGTATTCCAAAACTCTTCAACTTTACAAAGGAATTGAAGGAGCAAGAAAAACTGTTTTCTTCAAAAATAGAGTCATTGAATAAACTGAAGGACAATTTAAACGAGGATCAAACTGCTGAGTTGGAGAAATTGACCAGATGGTACAACACTCATAAGGAACAGTTTGATGAATTGGAAATACTTCTTTCAATGGTGCTTTTTGAAGGGAGAAGTACAACAAAACAGAGGTCAAAATCAGAGTCTTCAAAACATCCAAGCCAGTCACAAACTCTTCGTAAACTTCAGAATATTAGTGGACCTTTTTTCCCAAAGAAAATGTGCATAATGGACACAGACAAGAAACCAGAGGAAGGACAGGTTTCCTTTGGTGAACCTCAAAGTAGTGATTCCGTGGAGCTGCTTGGAGCCACCAGCACCTTCATGGGTCAGTTTGAAAAGGGTTTGAAAGAAATACAGGGAAACAAACACAACAAGAGCATCAAAGGGCTCAGAGAAGCCATTGTACAGAGACAGAAACCTACAGAGGACACTATTTCTGTAGCATCCAAAGGTTCATCCACTGCCGCTGACCAAGACAATGTAGACGCAGGCAAGCCTAACAGGACAATGCAGCTAAGCACCAAGGCTCCTTCAAAACCTACAGCGAAAACCGGCCCAAAGCCCACAAAACAAGGCTTTTTAGAAAAATTGAGCGGAGGAAAACACCAGTCTAAAAAATGGGACAACAGGTACTTCGAACTAACCGACACAGGGCACCTTCACTATTACAAGAAAGCAGATGGAGTTTTCTCCTGTAAAACAACCTTGGTTGTACTGCTCCATTCTCCACAAATTGTAGATTTTATGAATCCAGAAGCAGTAATCCACGATTTAGAAGAGAAGCTTGCCAAAACGAGCGCCAGGTGTAAGGAATTAGAGGCTGAGGTGTCGACTCTTAGAGCCAGAAATAAAGAATTGGAGAAAGATAAACAACAGAAAGGAGAGTGTGAGGGAAATGATGCCTCCAAGGAAACTGAGCAGGAAGCAAGAGAAAGTCGCGTGAGCGAAATTTTAGAGAAATGTAAGGAAGAGCTTGAAACGTACGTAACCCAACCTTTAGTGGTCCCGGAGGTCAGACATGATAATTTACCGACAACGGCAATCACAGTGGATGTCTTAAAAGTAATAAGCCAGCATTTGGAGGAACAATACAATACTACACTGGAAATAGCACCTGAAGCTTGTCAATGTAGCGAAGATCTTCGAAAATGTTTCCATGACTTTGCCTACCGGGCACTTCAAGCCGAGAACAATGAAATGAACCTTAAAATTAAAAACTTGAACAAAACGTTAAAAGAAGCACCCAAAGATGATAAAGAAGAGTTTGAAAATCTTAAGCGCCTTCAAAAACGTCGAAAAGATTTGGTGGTGAAATTAGTAAAATGGCGACGTTTGTTCTATCCGCTCTATGAAACAAGAGCCAGTTTTTGCTAA

Transcript

aint_s0047.g40.t2

CTCCATTTGGATCATGAATCACCAGGCGACTGGATTTGTTGCATGAGGCAGCGGACGACATGGTTTGACTTCAAAATAGGAGTGATTGCAGAACAACTTACGTAAACTTCGTTAATTTCCTGTTGAATACTCCAAGCACACAGGAAATCAAACTCAACCACGGACCACATCTCCACTTCGTTTTACCTCTTCCAATAATATGACGTCTTCAAACCAACTTGGTTGGGATCGAAAATACACCTTGAAAGAAGCTGATTTTCACGAAAAGAAGTTACCTGATGACATCGGAGTGAAGTGGAAAGAATTAGCGCGAGAACTGGGGTTCAACCATGCCTTTATTGATATCACTAAAGATAAAATCCATTGTGCCAGGGAATGCTGTATAGAAGTCCTTGTTTGTTGGCACCGCCAGGAAGGAGAGGACGCTACTGCTGAAAAGCTGTTTGAAGCCTTGGTCAACATAGGACTAAAAAGCGTAGCTGAAAGGTTCCCGTGCAAACCAAGTGATCCAAGCCAAGTTGACAAATTGAGCGCCAGGAATAAGAAATTAGAAGATGAGGTTGACAAAATGAGTGCCAGGAATAAGAAATTAGAGTATGAGAACTCCAGACAGAGTGCCAGGATTAAGGAATTAGAAGACATGATTCAGAAAAACAAGGCAGTGTTGGAGACTGTTGCTGTAGCTGTTCAGGAGATGGAAAAAAACCCAGAACAAAGAAGAGAAGAGATCTTAAAGCGCATCAATTCAGAAGTACAAGAACTGCTGCAACAACTGAAAAGAGTTGATGAGGACAACACTGACAAATATTTGGTGTCCTCTATTGATGGGAAAAATATAGCAAAGGATAACGAGCCTAAGAATGATTTATTATGTCATGATGCAACGGTTCCACAACAGGATGAGGTTCATTTGCTGCAGTCATGTGAAGAACAACTGTCATTATACCAAGGAATATTTGATGCTTTCATCAAGCTCATTCCTGAAGTTGGCGAACTGAAAGACAACTTCGAGAGTATTCCAAAACTCTTCAACTTTACAAAGGAATTGAAGGAGCAAGAAAAACTGTTTTCTTCAAAAATAGAGTCATTGAATAAACTGAAGGACAATTTAAACGAGGATCAAACTGCTGAGTTGGAGAAATTGACCAGATGGTACAACACTCATAAGGAACAGTTTGATGAATTGGAAATACTTCTTTCAATGGTGCTTTTTGAAGGGAGAAGTACAACAAAACAGAGGTCAAAATCAGAGTCTTCAAAACATCCAAGCCAGTCACAAACTCTTCGTAAACTTCAGAATATTAGTGGACCTTTTTTCCCAAAGAAAATGTGCATAATGGACACAGACAAGAAACCAGAGGAAGGACAGGTTTCCTTTGGTGAACCTCAAAGTAGTGATTCCGTGGAGCTGCTTGGAGCCACCAGCACCTTCATGGGTCAGTTTGAAAAGGGTTTGAAAGAAATACAGGGAAACAAACACAACAAGAGCATCAAAGGGCTCAGAGAAGCCATTGTACAGAGACAGAAACCTACAGAGGACACTATTTCTGTAGCATCCAAAGGTTCATCCACTGCCGCTGACCAAGACAATGTAGACGCAGGCAAGCCTAACAGGACAATGCAGCTAAGCACCAAGGCTCCTTCAAAACCTACAGCGAAAACCGGCCCAAAGCCCACAAAACAAGGCTTTTTAGAAAAATTGAGCGGAGGAAAACACCAGTCTAAAAAATGGGACAACAGGTACTTCGAACTAACCGACACAGGGCACCTTCACTATTACAAGAAAGCAGATGGAGTTTTCTCCTGTAAAACAACCTTGGTTGTACTGCTCCATTCTCCACAAATTGTAGATTTTATGAATCCAGAAGCAGTAATCCACGATTTAGAAGAGAAGCTTGCCAAAACGAGCGCCAGGTGTAAGGAATTAGAGGCTGAGGTGTCGACTCTTAGAGCCAGAAATAAAGAATTGGAGAAAGATAAACAACAGAAAGGAGAGTGTGAGGGAAATGATGCCTCCAAGGAAACTGAGCAGGAAGCAAGAGAAAGTCGCGTGAGCGAAATTTTAGAGAAATGTAAGGAAGAGCTTGAAACGTACGTAACCCAACCTTTAGTGGTCCCGGAGGTCAGACATGATAATTTACCGACAACGGCAATCACAGTGGATGTCTTAAAAGTAATAAGCCAGCATTTGGAGGAACAATACAATACTACACTGGAAATAGCACCTGAAGCTTGTCAATGTAGCGAAGATCTTCGAAAATGTTTCCATGACTTTGCCTACCGGGCACTTCAAGCCGAGAACAATGAAATGAACCTTAAAATTAAAAACTTGAACAAAACGTTAAAAGAAGCACCCAAAGATGATAAAGAAGAGTTTGAAAATCTTAAGCGCCTTCAAAAACGTCGAAAAGATTTGGTGGTGAAATTAGTAAAATGGCGACGTTTGTTCTATCCGCTCTATGAAACAAGAGCCAGTTTTTGCTAATTGTTGAGAGTCCTCCGACCAAAAAGTCCTCCCGTTTTATAGTTTGACTATCCTGGGTGCTAGAGGTTATTTTCTTCGGGTGAGGAGGCGAGCAAGTAATGAAAAGAGGTGAAAAAAAAAACATAAATAAAATAAACCCTAACCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR016729	Domain	FADD, death domain	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15077	FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan