Detailed information of aint_s0048.g23.t1 in Acropora intermedia

Genomic Location: sc0000048_pilon:229290...238565
NR annotation: XP_029191005.2, 18S rRNA aminocarboxypropyltransferase-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5HZH218S rRNA aminocarboxypropyltransferase OS=Mus musculus OX=10090 GN=Tsr3 PE=1 SV=1
Q9UJK018S rRNA aminocarboxypropyltransferase OS=Homo sapiens OX=9606 GN=TSR3 PE=1 SV=1
Q1209418S rRNA aminocarboxypropyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TSR3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04068RLIPossible Fer4-like domain in RNase L inhibitor, RLIFamilyInterproscan
PF04034Ribo_biogen_CRibosome biogenesis protein, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007209DomainRNase L inhibitor RLI-like, possible metal-binding domainInterproscan
IPR022968Family16S/18S rRNA aminocarboxypropyltransferase Tsr3Interproscan
IPR007177Domain16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20426RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0106388Molecular Function18S rRNA aminocarboxypropyltransferase activityInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09140TSR3; rRNA small subunit aminocarboxypropyltransferaseEC:2.5.1.157
Ribosome biogenesisko03009deepkoala

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